Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU67442 |
| length | 257 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G53950 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 21771276 ~ 21771532 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU67438 | lncRNA | upstream | 90016 | 21680745 ~ 21681260 (+) | True | G53946 |
| TU67430 | lncRNA | upstream | 197510 | 21573374 ~ 21573766 (+) | True | G53938 |
| TU67404 | lncRNA | upstream | 539071 | 21231754 ~ 21232205 (+) | True | G53913 |
| TU67403 | lncRNA | upstream | 539579 | 21231350 ~ 21231697 (+) | True | G53912 |
| TU67390 | lncRNA | upstream | 705279 | 21065158 ~ 21065997 (+) | True | G53900 |
| TU67448 | lncRNA | downstream | 78181 | 21849713 ~ 21850231 (+) | True | G53956 |
| TU67482 | lncRNA | downstream | 257152 | 22028684 ~ 22029096 (+) | True | G53987 |
| TU67483 | lncRNA | downstream | 257693 | 22029225 ~ 22029565 (+) | True | G53988 |
| TU67484 | lncRNA | downstream | 258609 | 22030141 ~ 22030434 (+) | True | G53989 |
| TU67487 | lncRNA | downstream | 272012 | 22043544 ~ 22044055 (+) | True | G53992 |
| AMCG00009038 | mRNA | upstream | 684251 | 20997898 ~ 21087025 (+) | True | AMCG00009038 |
| AMCG00009035 | mRNA | upstream | 1078889 | 20686145 ~ 20692387 (+) | True | AMCG00009035 |
| AMCG00009034 | mRNA | upstream | 1310262 | 20456457 ~ 20461014 (+) | True | AMCG00009034 |
| AMCG00009033 | mRNA | upstream | 1376457 | 20376795 ~ 20394819 (+) | False | AMCG00009033 |
| AMCG00009032 | mRNA | upstream | 1507410 | 20263075 ~ 20263866 (+) | True | AMCG00009032 |
| AMCG00009042 | mRNA | downstream | 658808 | 22430340 ~ 22441467 (+) | True | AMCG00009042 |
| AMCG00009043 | mRNA | downstream | 841820 | 22613352 ~ 22631352 (+) | True | AMCG00009043 |
| AMCG00009049 | mRNA | downstream | 861185 | 22632717 ~ 22648476 (+) | True | AMCG00009049 |
| AMCG00009050 | mRNA | downstream | 898352 | 22669884 ~ 22686612 (+) | True | AMCG00009050 |
| AMCG00009052 | mRNA | downstream | 932654 | 22704186 ~ 22705397 (+) | True | AMCG00009052 |
| TU67408 | other | upstream | 477375 | 21292241 ~ 21293901 (+) | True | G53917 |
| TU67406 | other | upstream | 495922 | 21274611 ~ 21275354 (+) | True | G53915 |
| TU67402 | other | upstream | 602701 | 21168231 ~ 21168575 (+) | True | G53911 |
| TU66948 | other | upstream | 3217316 | 18550772 ~ 18553960 (+) | True | G53520 |
| TU66780 | other | upstream | 3851223 | 17917666 ~ 17920053 (+) | False | AMCG00009009 |
| TU67814 | other | downstream | 2111785 | 23883317 ~ 23975906 (+) | True | G54263 |
| TU68049 | other | downstream | 3041086 | 24812618 ~ 24816534 (+) | True | AMCG00009085 |
| TU68059 | other | downstream | 3143497 | 24915029 ~ 24917863 (+) | False | AMCG00009088 |
| TU68288 | other | downstream | 3813360 | 25584892 ~ 25587610 (+) | False | AMCG00009108 |
| TU68775 | other | downstream | 5842051 | 27613583 ~ 27617378 (+) | False | AMCG00009164 |
