RNA id: TU67676



Basic Information


Item Value
RNA id TU67676
length 222
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G54138
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 22976461 ~ 22976682 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gtagcagaaggcagtttgtttgccgaagggctggagagcggtacacgaatgagtgtctgcaggcaacagtgaagcatggtggaggttccttgcaagtttggggctgcatttctgcaaatggagttggggatttggtcagaatgaatggtctcctcaatgctgagaagtacaggcagatacttatccatcatgcaataccatcagggaggcatctgattggcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU67644 lncRNA upstream 118939 22778375 ~ 22857522 (+) True G54112
TU67649 lncRNA upstream 165865 22806239 ~ 22810596 (+) True G54116
TU67632 lncRNA upstream 268617 22707141 ~ 22707844 (+) True G54101
TU67571 lncRNA upstream 285281 22689938 ~ 22691180 (+) True G54063
TU67534 lncRNA upstream 372984 22534593 ~ 22603477 (+) True G54032
TU67706 lncRNA downstream 192759 23169441 ~ 23191582 (+) True G54166
TU67717 lncRNA downstream 257941 23234623 ~ 23235029 (+) True G54174
TU67740 lncRNA downstream 470472 23447154 ~ 23449477 (+) True G54194
TU67786 lncRNA downstream 686711 23663393 ~ 23664094 (+) True G54237
TU67787 lncRNA downstream 687475 23664157 ~ 23664652 (+) True G54238
AMCG00009053 mRNA upstream 121967 22850991 ~ 22854494 (+) True AMCG00009053
AMCG00009052 mRNA upstream 271064 22704186 ~ 22705397 (+) True AMCG00009052
AMCG00009050 mRNA upstream 289849 22669884 ~ 22686612 (+) True AMCG00009050
AMCG00009049 mRNA upstream 327985 22632717 ~ 22648476 (+) True AMCG00009049
AMCG00009043 mRNA upstream 345109 22613352 ~ 22631352 (+) True AMCG00009043
AMCG00009056 mRNA downstream 681519 23658201 ~ 23662213 (+) True AMCG00009056
AMCG00009058 mRNA downstream 840143 23816825 ~ 23825087 (+) True AMCG00009058
AMCG00009059 mRNA downstream 848540 23825222 ~ 23840982 (+) True AMCG00009059
AMCG00009061 mRNA downstream 896026 23872708 ~ 23885824 (+) True AMCG00009061
AMCG00009064 mRNA downstream 1052710 24029392 ~ 24049944 (+) True AMCG00009064
TU67408 other upstream 1682560 21292241 ~ 21293901 (+) True G53917
TU67406 other upstream 1701107 21274611 ~ 21275354 (+) True G53915
TU67402 other upstream 1807886 21168231 ~ 21168575 (+) True G53911
TU66948 other upstream 4422501 18550772 ~ 18553960 (+) True G53520
TU66780 other upstream 5056408 17917666 ~ 17920053 (+) False AMCG00009009
TU67814 other downstream 906635 23883317 ~ 23975906 (+) True G54263
TU68049 other downstream 1835936 24812618 ~ 24816534 (+) True AMCG00009085
TU68059 other downstream 1938347 24915029 ~ 24917863 (+) False AMCG00009088
TU68288 other downstream 2608210 25584892 ~ 25587610 (+) False AMCG00009108
TU68775 other downstream 4636901 27613583 ~ 27617378 (+) False AMCG00009164

Expression Profile