RNA id: TU67706



Basic Information


Item Value
RNA id TU67706
length 296
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G54166
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 23169441 ~ 23191582 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atatacactcacctaaaggattattaggaacaccatactaatactgtgtttgaccccctttcgccttcagaactgcctaaattctacgtggcattgattcaacaaggtgctgaaagcattctttagaaatgttggcccatattgataggatagcatcttgcagttgatggagatttgtgggatgcacatccagggcacgaagctccggttccaccacatcccaaagatgctctattgagttgaaatctggtgactgtgggggccaatttagtacagtgaactcattgtcatgttca

Function


GO: NA

KEGG:

id description
ko05164 Influenza A
ko05162 Measles

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU67676 lncRNA upstream 192759 22976461 ~ 22976682 (+) True G54138
TU67644 lncRNA upstream 311919 22778375 ~ 22857522 (+) True G54112
TU67649 lncRNA upstream 358845 22806239 ~ 22810596 (+) True G54116
TU67632 lncRNA upstream 461597 22707141 ~ 22707844 (+) True G54101
TU67571 lncRNA upstream 478261 22689938 ~ 22691180 (+) True G54063
TU67717 lncRNA downstream 43041 23234623 ~ 23235029 (+) True G54174
TU67740 lncRNA downstream 255572 23447154 ~ 23449477 (+) True G54194
TU67786 lncRNA downstream 471811 23663393 ~ 23664094 (+) True G54237
TU67787 lncRNA downstream 472575 23664157 ~ 23664652 (+) True G54238
TU67815 lncRNA downstream 698545 23890127 ~ 23894287 (+) True G54264
AMCG00009053 mRNA upstream 314947 22850991 ~ 22854494 (+) True AMCG00009053
AMCG00009052 mRNA upstream 464044 22704186 ~ 22705397 (+) True AMCG00009052
AMCG00009050 mRNA upstream 482829 22669884 ~ 22686612 (+) True AMCG00009050
AMCG00009049 mRNA upstream 520965 22632717 ~ 22648476 (+) True AMCG00009049
AMCG00009043 mRNA upstream 538089 22613352 ~ 22631352 (+) True AMCG00009043
AMCG00009056 mRNA downstream 466619 23658201 ~ 23662213 (+) True AMCG00009056
AMCG00009058 mRNA downstream 625243 23816825 ~ 23825087 (+) True AMCG00009058
AMCG00009059 mRNA downstream 633640 23825222 ~ 23840982 (+) True AMCG00009059
AMCG00009061 mRNA downstream 681126 23872708 ~ 23885824 (+) True AMCG00009061
AMCG00009064 mRNA downstream 837810 24029392 ~ 24049944 (+) True AMCG00009064
TU67408 other upstream 1875540 21292241 ~ 21293901 (+) True G53917
TU67406 other upstream 1894087 21274611 ~ 21275354 (+) True G53915
TU67402 other upstream 2000866 21168231 ~ 21168575 (+) True G53911
TU66948 other upstream 4615481 18550772 ~ 18553960 (+) True G53520
TU66780 other upstream 5249388 17917666 ~ 17920053 (+) False AMCG00009009
TU67814 other downstream 691735 23883317 ~ 23975906 (+) True G54263
TU68049 other downstream 1621036 24812618 ~ 24816534 (+) True AMCG00009085
TU68059 other downstream 1723447 24915029 ~ 24917863 (+) False AMCG00009088
TU68288 other downstream 2393310 25584892 ~ 25587610 (+) False AMCG00009108
TU68775 other downstream 4422001 27613583 ~ 27617378 (+) False AMCG00009164

Expression Profile