RNA id: TU67708



Basic Information


Item Value
RNA id TU67708
length 318
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G54167
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 23169439 ~ 23169829 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gatgagtctCAATTTCTGTTGAGACATTCAGAGTCAGAATTTGGCGAaaacagaatgagaacatgcatccatcatgccttgttaccactgtgcaggctggtggtggtggtgtaatggtgtgggggatgttttcttggcacactttaggccccttagtgccaattgggcatcgtttaaatgccacggcctacctgagcattgtttctgaccatgtccatccctttatgaccaccatgtacccatcctctgatggcgaaagggggtcaaacacagtattagtatggtgttcctaataatcctttaggtgagtgtatatac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU67700 lncRNA downstream 29747 23139455 ~ 23139692 (-) True G54161
TU67677 lncRNA downstream 192757 22976461 ~ 22976682 (-) True G54139
TU67662 lncRNA downstream 342827 22793012 ~ 22826612 (-) True G54124
TU67599 lncRNA downstream 538931 22629331 ~ 22630508 (-) True G54078
TU67504 lncRNA downstream 865546 22303608 ~ 22303893 (-) True G54008
TU67711 lncRNA upstream 10498 23180327 ~ 23191495 (-) False G54168
TU67710 lncRNA upstream 11327 23181156 ~ 23191495 (-) True G54168
TU67722 lncRNA upstream 132625 23302454 ~ 23302685 (-) True G54179
TU67824 lncRNA upstream 647233 23817062 ~ 23819790 (-) True G54273
TU67839 lncRNA upstream 668285 23838114 ~ 23847003 (-) False AMCG00009060
AMCG00009051 mRNA downstream 351446 22721882 ~ 22817993 (-) True AMCG00009051
AMCG00009048 mRNA downstream 503254 22648694 ~ 22666185 (-) True AMCG00009048
AMCG00009045 mRNA downstream 562552 22559529 ~ 22606887 (-) True AMCG00009045
AMCG00009046 mRNA downstream 612451 22540747 ~ 22556988 (-) True AMCG00009046
AMCG00009047 mRNA downstream 640175 22511192 ~ 22529264 (-) True AMCG00009047
AMCG00009054 mRNA upstream 208778 23378607 ~ 23402492 (-) True AMCG00009054
AMCG00009055 mRNA upstream 280716 23450545 ~ 23469100 (-) True AMCG00009055
AMCG00009057 mRNA upstream 475625 23645454 ~ 23656150 (-) True AMCG00009057
AMCG00009060 mRNA upstream 655400 23825229 ~ 23863035 (-) True AMCG00009060
AMCG00009062 mRNA upstream 724265 23894094 ~ 23914458 (-) True AMCG00009062
TU67499 other downstream 985874 22183088 ~ 22183565 (-) True G54003
TU67292 other downstream 2905354 20200747 ~ 20264085 (-) True G53809
TU67291 other downstream 2905354 20252904 ~ 20264085 (-) False G53809
TU66751 other downstream 5300743 17868386 ~ 17868696 (-) True G53355
TU66702 other downstream 5422396 17736589 ~ 17747043 (-) False AMCG00009001
TU68185 other upstream 1983437 25153266 ~ 25156338 (-) True G54544
TU68195 other upstream 2003848 25173677 ~ 25176378 (-) True AMCG00009100
TU68523 other upstream 3623712 26793541 ~ 26796654 (-) True G54821
TU68783 other upstream 4443769 27613598 ~ 27618089 (-) True AMCG00009165
TU69243 other upstream 5888455 29058284 ~ 29063030 (-) False AMCG00009215

Expression Profile