RNA id: TU68641



Basic Information


Item Value
RNA id TU68641
length 237
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G54928
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 27096537 ~ 27096773 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


taataaaactgtgaagtgctatctagcagggatagaggactaatattacaagtgctgtcggaagagatgcgtcttgagtaagcgccggaatgaggtcaaggactctgccgttttgacttcagtgggcaggtcgttccaccatttaggggtcagggatgagaaggagcggctctggaggaaggagagtggagaggaggtagagttagtcttctggctctggaggggatgtatggagag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU68587 lncRNA upstream 112380 26982843 ~ 26984157 (+) True G54880
TU68536 lncRNA upstream 245534 26849222 ~ 26851003 (+) True G54833
TU68512 lncRNA upstream 271608 26822296 ~ 26824929 (+) True G54812
TU68500 lncRNA upstream 282045 26810651 ~ 26814492 (+) True G54806
TU68503 lncRNA upstream 285286 26810651 ~ 26811251 (+) False G54806
TU68649 lncRNA downstream 14107 27110880 ~ 27117923 (+) True G54936
TU68661 lncRNA downstream 217182 27313955 ~ 27317157 (+) True G54948
TU68662 lncRNA downstream 222995 27319768 ~ 27319971 (+) True G54949
TU68663 lncRNA downstream 225176 27321949 ~ 27322190 (+) True G54950
TU68664 lncRNA downstream 225767 27322540 ~ 27322795 (+) True G54951
AMCG00009144 mRNA upstream 8679 27077814 ~ 27087858 (+) True AMCG00009144
AMCG00009146 mRNA upstream 37577 27037329 ~ 27058960 (+) True AMCG00009146
AMCG00009145 mRNA upstream 63580 26994958 ~ 27032957 (+) True AMCG00009145
AMCG00009140 mRNA upstream 114686 26969885 ~ 26981851 (+) True AMCG00009140
AMCG00009139 mRNA upstream 193265 26898609 ~ 26903272 (+) True AMCG00009139
AMCG00009147 mRNA downstream 5723 27102496 ~ 27104891 (+) True AMCG00009147
AMCG00009150 mRNA downstream 267532 27364305 ~ 27377706 (+) True AMCG00009150
AMCG00009154 mRNA downstream 287995 27384768 ~ 27389302 (+) True AMCG00009154
AMCG00009153 mRNA downstream 306515 27403288 ~ 27416448 (+) True AMCG00009153
AMCG00009152 mRNA downstream 364457 27461230 ~ 27477658 (+) True AMCG00009152
TU68288 other upstream 1508927 25584892 ~ 25587610 (+) False AMCG00009108
TU68059 other upstream 2178674 24915029 ~ 24917863 (+) False AMCG00009088
TU68049 other upstream 2280003 24812618 ~ 24816534 (+) True AMCG00009085
TU67814 other upstream 3120631 23883317 ~ 23975906 (+) True G54263
TU67408 other upstream 5802636 21292241 ~ 21293901 (+) True G53917
TU68775 other downstream 516810 27613583 ~ 27617378 (+) False AMCG00009164
TU69158 other downstream 1669681 28766454 ~ 28777621 (+) False AMCG00009204
TU69199 other downstream 1832119 28928892 ~ 29011768 (+) True AMCG00009207
TU69266 other downstream 2006867 29103640 ~ 29106908 (+) True AMCG00009208
TU69269 other downstream 2006867 29103640 ~ 29106908 (+) False AMCG00009208

Expression Profile