RNA id: TU68913


Basic Information

Item Value
RNA id TU68913
length 260
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G55153
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 27871002 ~ 27871261 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AGGACGTTTGGATGTAGGTACATAGATCTTATTGGAAGGACATGTGGAAGGGGCAGGATTAGAGGAAAGTTCCCTTTGAAGTTGATCCAAGAAATCCCATTTGATTGGGGCGACAATACAGGTAGAGGGTAGAATTGGATCATCAGATAGGGGTTCATGAACCGAGTCAAACTGACGAGAGAGAGCGTCTGCTTTGATGTTTTTCGATCCTGGGCGATAAGTCATGGTGAATTGGAAACGAGTGAAAAATAATGCCCAGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU68749 lncRNA downstream 343508 27526047 ~ 27527494 (-) True G55026
TU68748 lncRNA downstream 345023 27525686 ~ 27525979 (-) True G55025
TU68693 lncRNA downstream 448324 27420818 ~ 27422678 (-) True G54978
TU68666 lncRNA downstream 554275 27314317 ~ 27316727 (-) False AMCG00009151
TU68653 lncRNA downstream 756516 27112482 ~ 27114486 (-) False AMCG00009148
TU68988 lncRNA upstream 513822 28385083 ~ 28387604 (-) False AMCG00009186
TU69061 lncRNA upstream 617390 28488651 ~ 28505796 (-) True G55268
TU69139 lncRNA upstream 850279 28721540 ~ 28727970 (-) True G55326
TU69150 lncRNA upstream 884037 28755298 ~ 28755633 (-) True G55333
TU69188 lncRNA upstream 972212 28843473 ~ 28893883 (-) True G55359
AMCG00009174 mRNA downstream 72352 27791373 ~ 27798650 (-) True AMCG00009174
AMCG00009171 mRNA downstream 142800 27720870 ~ 27728202 (-) True AMCG00009171
AMCG00009172 mRNA downstream 160530 27696730 ~ 27710472 (-) True AMCG00009172
AMCG00009167 mRNA downstream 185955 27673672 ~ 27685047 (-) True AMCG00009167
AMCG00009168 mRNA downstream 214424 27625791 ~ 27656578 (-) True AMCG00009168
AMCG00009178 mRNA upstream 493017 28364278 ~ 28378869 (-) True AMCG00009178
AMCG00009179 mRNA upstream 509687 28380948 ~ 28383523 (-) True AMCG00009179
AMCG00009186 mRNA upstream 516102 28387363 ~ 28390096 (-) True AMCG00009186
AMCG00009185 mRNA upstream 519150 28390411 ~ 28401946 (-) True AMCG00009185
AMCG00009183 mRNA upstream 537668 28408929 ~ 28445500 (-) True AMCG00009183
TU68783 other downstream 252913 27613598 ~ 27618089 (-) True AMCG00009165
TU68523 other downstream 1074348 26793541 ~ 26796654 (-) True G54821
TU68195 other downstream 2694624 25173677 ~ 25176378 (-) True AMCG00009100
TU68185 other downstream 2714664 25153266 ~ 25156338 (-) True G54544
TU67499 other downstream 5687437 22183088 ~ 22183565 (-) True G54003
TU69243 other upstream 1187023 29058284 ~ 29063030 (-) False AMCG00009215
TU69394 other upstream 1789699 29660960 ~ 29670337 (-) True AMCG00009229
TU69579 other upstream 2378610 30249871 ~ 30254483 (-) True AMCG00009241
TU69693 other upstream 2731318 30602579 ~ 30657612 (-) False AMCG00009265
TU69850 other upstream 3063303 30934564 ~ 30937251 (-) True G55878

Expression Profile