RNA id: TU69185



Basic Information


Item Value
RNA id TU69185
length 718
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G55357
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 28897976 ~ 28898693 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TTTTAGCTGTAACTATATTGTAAACAAGTTCATGGAAACTATGGCAGAAGACTGACCACATATTTGGATGATTTGCAAAACATAGGTATCATGTATCCTATAAGTATCATGTTGCAGATACAAATAACCCATGGAAACAGTCGGTTTTCACTATCtttctcaatatttttttaccacCATGGAATTACTAGTGCTaccttttttggtttttaagaCTTATCTAGCCAGTTAAAAACATATAGCACATTGAGTTTCATGGAACACCTCGACCATTAGCCTGATGTCATAGAAATGGGTATTCATCTATGGTTTCAAACAATTTGTTCAGTAGTTCAGACATTGTGCTATAGAAGTAGGTGGAAGTTGTGATTGAAGTAATGGACTTAGTTTTGCCTTAACCCATTTTGCTGAGGGAACAGCAACCTGACCATGAGGACGAGGCCATTGGACCCTCCTTCACACGCATGGTGGATGGAGCCAAGGAGCCACTGCAAAAGCTGAGACTAAGGAGACGGAGCGATGTTGTTCTGCGTTTAAGCAAGAGGGCAGCGTAGTTGCGGCACTATGGGAGTGAGCTACTGACACAGGCTAAAGGAACTTGTTGCAAAGTATTTGATAAGAGTGTGTATGTGAGGATATGTCTCATTGGTTAAGCTTGGAACAGAGTGATGTGTGATTGGCGGTTGTCTACCTCCCAAACTTTTAGTTGTAATCTCCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU69110 lncRNA upstream 264644 28632355 ~ 28633332 (+) True G55308
TU69101 lncRNA upstream 267679 28627663 ~ 28630297 (+) True G55300
TU69038 lncRNA upstream 432750 28464562 ~ 28465226 (+) True G55257
TU68978 lncRNA upstream 514473 28383000 ~ 28383503 (+) True G55205
TU68977 lncRNA upstream 516677 28380980 ~ 28381299 (+) True G55204
TU69229 lncRNA downstream 130625 29029318 ~ 29031478 (+) True G55394
TU69310 lncRNA downstream 286228 29184921 ~ 29185184 (+) True G55461
TU69312 lncRNA downstream 288001 29186694 ~ 29187955 (+) True G55463
TU69342 lncRNA downstream 559728 29458421 ~ 29458743 (+) True G55487
TU69374 lncRNA downstream 742796 29641489 ~ 29641936 (+) True G55512
AMCG00009203 mRNA upstream 4932 28867586 ~ 28893044 (+) True AMCG00009203
AMCG00009205 mRNA upstream 61564 28802969 ~ 28836412 (+) True AMCG00009205
AMCG00009204 mRNA upstream 98376 28767622 ~ 28799600 (+) True AMCG00009204
AMCG00009198 mRNA upstream 135458 28756555 ~ 28762518 (+) True AMCG00009198
AMCG00009200 mRNA upstream 142802 28736283 ~ 28755174 (+) True AMCG00009200
AMCG00009206 mRNA downstream 11620 28910313 ~ 28926828 (+) True AMCG00009206
AMCG00009207 mRNA downstream 83636 28982329 ~ 28984320 (+) False AMCG00009207
AMCG00009202 mRNA downstream 115699 29014392 ~ 29019892 (+) True AMCG00009202
AMCG00009214 mRNA downstream 176388 29075081 ~ 29102077 (+) True AMCG00009214
AMCG00009208 mRNA downstream 204915 29103608 ~ 29108227 (+) False AMCG00009208
TU69158 other upstream 120355 28766454 ~ 28777621 (+) False AMCG00009204
TU68775 other upstream 1280598 27613583 ~ 27617378 (+) False AMCG00009164
TU68288 other upstream 3310366 25584892 ~ 25587610 (+) False AMCG00009108
TU68059 other upstream 3980113 24915029 ~ 24917863 (+) False AMCG00009088
TU68049 other upstream 4081442 24812618 ~ 24816534 (+) True AMCG00009085
TU69199 other downstream 30199 28928892 ~ 29011768 (+) True AMCG00009207
TU69266 other downstream 204947 29103640 ~ 29106908 (+) True AMCG00009208
TU69269 other downstream 204947 29103640 ~ 29106908 (+) False AMCG00009208
TU69299 other downstream 274446 29173139 ~ 29174700 (+) True AMCG00009220
TU69455 other downstream 1009218 29907911 ~ 29911564 (+) True G55573

Expression Profile