RNA id: TU69474



Basic Information


Item Value
RNA id TU69474
length 313
RNA type TUCP
GC content 0.56
exon number 1
gene id G55591
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 29995126 ~ 29995438 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ctctttctgtgtttttgctcACCAAGCCCACGGTGATCTGCCCCTCTTTGATGCAGGTCCCTGTGTGTGCCAATTTGAAGATCTCCAGCAGTTCATCTTTGGACAGCAGGCGGCTGGAGTTGTGGATGGCCTTTCTGCAGGAGGACGCGGCCGCCCCGTCCTGCTCGGAGTCGTCTGAGTCTTCAGAGCAGGTCTGCCAGGCTCCCTCCTCCACACAGTCTTCAAACCTATCCTCCCCCTCCTCGACCTCCACTTCATTACTAATCATTTCTTCCTCCATCCAGTCTCCCTCGCCATCACTGTGCTCCTCCTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU69479 lncRNA upstream 485 29993622 ~ 29994641 (+) True G55595
TU69469 lncRNA upstream 18859 29975603 ~ 29976267 (+) True G55586
TU69445 lncRNA upstream 62974 29858295 ~ 29932152 (+) False G55564
TU69444 lncRNA upstream 62974 29929775 ~ 29932152 (+) True G55564
TU69374 lncRNA upstream 353190 29641489 ~ 29641936 (+) True G55512
TU69480 lncRNA downstream 125 29995563 ~ 29995870 (+) True G55596
TU69481 lncRNA downstream 2791 29998229 ~ 29998486 (+) True G55597
TU69522 lncRNA downstream 146774 30142212 ~ 30222127 (+) True G55620
TU69565 lncRNA downstream 241486 30236924 ~ 30240492 (+) True G55649
TU69568 lncRNA downstream 241486 30236924 ~ 30240492 (+) False G55649
AMCG00009231 mRNA upstream 134757 29858925 ~ 29860369 (+) True AMCG00009231
AMCG00009226 mRNA upstream 252521 29717027 ~ 29742605 (+) True AMCG00009226
AMCG00009227 mRNA upstream 341789 29648617 ~ 29653337 (+) True AMCG00009227
AMCG00009222 mRNA upstream 422073 29563108 ~ 29573053 (+) True AMCG00009222
AMCG00009223 mRNA upstream 465632 29528879 ~ 29529494 (+) True AMCG00009223
AMCG00009237 mRNA downstream 13364 30008802 ~ 30009842 (+) True AMCG00009237
AMCG00009238 mRNA downstream 191462 30186900 ~ 30208729 (+) True AMCG00009238
AMCG00009239 mRNA downstream 223431 30218869 ~ 30223477 (+) True AMCG00009239
AMCG00009250 mRNA downstream 269815 30265253 ~ 30298128 (+) True AMCG00009250
AMCG00009246 mRNA downstream 317356 30312794 ~ 30327528 (+) True AMCG00009246
TU69455 other upstream 83562 29907911 ~ 29911564 (+) True G55573
TU69299 other upstream 820426 29173139 ~ 29174700 (+) True AMCG00009220
TU69266 other upstream 888218 29103640 ~ 29106908 (+) True AMCG00009208
TU69269 other upstream 888218 29103640 ~ 29106908 (+) False AMCG00009208
TU69199 other upstream 983358 28928892 ~ 29011768 (+) True AMCG00009207
TU70069 other downstream 2166322 32161760 ~ 32165365 (+) True G56060
TU70453 other downstream 4005358 34000796 ~ 34031445 (+) True G56368
TU70456 other downstream 4020232 34015670 ~ 34018815 (+) True G56369
TU70668 other downstream 5393476 35388914 ~ 35389327 (+) True G56536
TU70945 other downstream 7364663 37360101 ~ 37367671 (+) True AMCG00009405

Expression Profile