RNA id: TU69680



Basic Information


Item Value
RNA id TU69680
length 627
lncRNA type inter_gene
GC content 0.36
exon number 2
gene id G55745
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 30599474 ~ 30602032 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATTCAATTCTTAAAGGTGTTTTTCCAAGTATTTCATACAACTTACTAGTGAACACAACTATTGTCACTGGAGTTCCTTGAGAAACATTATCTGCTGCCACAGCAATGACCCCTAGAGTATAATTGCTCCCGGATACAAGTCCAGATATTTCAGTTGACAACGTGTTCATTCCAAGACTCTTAACAGTCACTCCATTGGCTTCAACTCTGTACCCCCCTGCATTTCCAGATGGTGCACTCCAGCTAAGAGCTATGGATGTTGTGCTGATGTTGATGGTAATCAGATTGGTAACCACTTCAGGGTCTGGAGAAGACAGTGGGATGAGCCAGAAATAATCTTCCAAATAGACTTCACAGTGTATTTATCAACATATTATATGATTTGAGTTCGACAATATGAAATCATATACCAAGCTGAGGCTCACTGACTtggaaattgaaattatttgtgtatgtgagAAGAATGATTATAGAGCAGTGATTTCCAGATTCATTCATATTGATACAATACATGAAACAATGATTTACCTGCTGTcaatgcaacatttatttatctgtaaaAAACGAATAAAACTAATGAAATTGCAACTCTAGGCAATAAACTTCAAATGGTAAAAACCTAATTTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU69639 lncRNA upstream 102328 30495543 ~ 30497604 (+) True G55707
TU69569 lncRNA upstream 357201 30239333 ~ 30242731 (+) False G55649
TU69565 lncRNA upstream 359440 30236924 ~ 30240492 (+) True G55649
TU69568 lncRNA upstream 359440 30236924 ~ 30240492 (+) False G55649
TU69522 lncRNA upstream 377805 30142212 ~ 30222127 (+) True G55620
TU69754 lncRNA downstream 345334 30947366 ~ 30950209 (+) True G55800
TU69761 lncRNA downstream 553486 31155518 ~ 31163151 (+) True G55807
TU69914 lncRNA downstream 940589 31542621 ~ 31547232 (+) True G55926
TU69917 lncRNA downstream 946499 31548531 ~ 31552162 (+) True G55929
TU70028 lncRNA downstream 1451755 32053787 ~ 32057482 (+) True G56021
AMCG00009252 mRNA upstream 41640 30552556 ~ 30558292 (+) True AMCG00009252
AMCG00009251 mRNA upstream 69440 30517226 ~ 30530492 (+) True AMCG00009251
AMCG00009247 mRNA upstream 116551 30446676 ~ 30483381 (+) True AMCG00009247
AMCG00009245 mRNA upstream 178508 30407870 ~ 30421424 (+) True AMCG00009245
AMCG00009249 mRNA upstream 195692 30388953 ~ 30404240 (+) True AMCG00009249
AMCG00009257 mRNA downstream 14862 30616894 ~ 30642141 (+) True AMCG00009257
AMCG00009256 mRNA downstream 40174 30642206 ~ 30774490 (+) True AMCG00009256
AMCG00009264 mRNA downstream 236861 30838893 ~ 30846488 (+) True AMCG00009264
AMCG00009260 mRNA downstream 263459 30865491 ~ 30877032 (+) True AMCG00009260
AMCG00009259 mRNA downstream 326142 30928174 ~ 30935918 (+) True AMCG00009259
TU69474 other upstream 604494 29995126 ~ 29995438 (+) True G55591
TU69455 other upstream 688368 29907911 ~ 29911564 (+) True G55573
TU69299 other upstream 1425232 29173139 ~ 29174700 (+) True AMCG00009220
TU69266 other upstream 1493024 29103640 ~ 29106908 (+) True AMCG00009208
TU70069 other downstream 1559728 32161760 ~ 32165365 (+) True G56060
TU70453 other downstream 3398764 34000796 ~ 34031445 (+) True G56368
TU70456 other downstream 3413638 34015670 ~ 34018815 (+) True G56369
TU70668 other downstream 4786882 35388914 ~ 35389327 (+) True G56536
TU70945 other downstream 6758069 37360101 ~ 37367671 (+) True AMCG00009405

Expression Profile