RNA id: TU69990



Basic Information


Item Value
RNA id TU69990
length 228
lncRNA type intronic
GC content 0.49
exon number 2
gene id G55991
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 31950422 ~ 31950673 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tccacacttcaagaaggatatcgctgctatagaggcagttcagagaagagcaaccagacttattccaggtctgaagggaaagtcctactcagagagactgagggaactgaaccttttcaccctggaacagaggagactacgtggggacttgatccaagtcttcaaaatcatgaaaggcatcgaccacatcagcagggacacacgcacccggggacacaaatggaaatt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU69967 lncRNA downstream 35049 31915168 ~ 31915373 (-) True G55975
TU69824 lncRNA downstream 1134331 30809576 ~ 30816091 (-) True G55861
TU69697 lncRNA downstream 1295401 30652912 ~ 30655021 (-) True G55760
TU69654 lncRNA downstream 1458442 30491238 ~ 30491980 (-) True G55722
TU69634 lncRNA downstream 1467049 30480779 ~ 30483373 (-) True G55703
TU70018 lncRNA upstream 47404 31998077 ~ 32031970 (-) True G56012
TU70199 lncRNA upstream 849862 32800535 ~ 32800895 (-) True G56163
TU70223 lncRNA upstream 893422 32844095 ~ 32844336 (-) True G56185
TU70321 lncRNA upstream 1082304 33032977 ~ 33038239 (-) True G56256
TU70324 lncRNA upstream 1145324 33095997 ~ 33096230 (-) True G56259
AMCG00009287 mRNA downstream 30571 31919162 ~ 31919851 (-) True AMCG00009287
AMCG00009286 mRNA downstream 41228 31906726 ~ 31909194 (-) True AMCG00009286
AMCG00009285 mRNA downstream 49998 31882629 ~ 31900424 (-) True AMCG00009285
AMCG00009282 mRNA downstream 140959 31786769 ~ 31809463 (-) True AMCG00009282
AMCG00009279 mRNA downstream 387362 31542662 ~ 31563060 (-) True AMCG00009279
AMCG00009297 mRNA upstream 103135 32053808 ~ 32060010 (-) True AMCG00009297
AMCG00009294 mRNA upstream 116170 32066843 ~ 32083265 (-) True AMCG00009294
AMCG00009295 mRNA upstream 135129 32085802 ~ 32092762 (-) True AMCG00009295
AMCG00009296 mRNA upstream 148117 32098790 ~ 32109793 (-) True AMCG00009296
AMCG00009300 mRNA upstream 188695 32139368 ~ 32141324 (-) True AMCG00009300
TU69876 other downstream 765456 31165011 ~ 31184966 (-) True AMCG00009275
TU69861 other downstream 964427 30972953 ~ 30985995 (-) True AMCG00009269
TU69860 other downstream 1003211 30944367 ~ 30947211 (-) True G55881
TU69850 other downstream 1013171 30934564 ~ 30937251 (-) True G55878
TU69693 other downstream 1292810 30602579 ~ 30657612 (-) False AMCG00009265
TU70548 other upstream 2276601 34227274 ~ 34229389 (-) False AMCG00009342
TU70552 other upstream 2288811 34239484 ~ 34279180 (-) True G56438
TU70685 other upstream 3588214 35538887 ~ 35539810 (-) False G56546
TU70686 other upstream 3588214 35538887 ~ 35539810 (-) True G56546
TU70688 other upstream 3588214 35538887 ~ 35539810 (-) False G56546

Expression Profile