RNA id: TU70326



Basic Information


Item Value
RNA id TU70326
length 252
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G56261
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 33106370 ~ 33106621 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tccaaattccccagatctcaatccaatcgagcatctgtgggatgtgctggacaaacaagtccgatccatggaggccccacctcgcaacttacaggacttaaaggatctgctgttaacgtcttggtgccagataccacagcacaccttcagaggtctagtggagtccatgcctcgacgggtcagggctgttttggcggcaaaagggggacctacacaatattaggcaggtggtcataatgttttggctgatcg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU70257 lncRNA upstream 155404 32948137 ~ 32950966 (+) False G56211
TU70258 lncRNA upstream 155404 32948137 ~ 32950966 (+) True G56211
TU70149 lncRNA upstream 552466 32548007 ~ 32553904 (+) True G56120
TU70077 lncRNA upstream 927111 32174307 ~ 32179259 (+) True G56064
TU70072 lncRNA upstream 938322 32166865 ~ 32168048 (+) True G56062
TU70327 lncRNA downstream 3118 33109739 ~ 33110019 (+) True G56262
TU70333 lncRNA downstream 174916 33281537 ~ 33281764 (+) True G56268
TU70350 lncRNA downstream 350270 33456891 ~ 33457172 (+) True G56282
TU70463 lncRNA downstream 931513 34038134 ~ 34042259 (+) True G56376
TU70484 lncRNA downstream 938869 34045490 ~ 34078839 (+) True G56379
AMCG00009317 mRNA upstream 50882 33050004 ~ 33055488 (+) True AMCG00009317
AMCG00009318 mRNA upstream 89799 33005975 ~ 33016571 (+) True AMCG00009318
AMCG00009313 mRNA upstream 182932 32907934 ~ 32923438 (+) True AMCG00009313
AMCG00009312 mRNA upstream 258497 32847550 ~ 32847873 (+) True AMCG00009312
AMCG00009309 mRNA upstream 305929 32783131 ~ 32800441 (+) True AMCG00009309
AMCG00009319 mRNA downstream 149848 33256469 ~ 33257811 (+) True AMCG00009319
AMCG00009320 mRNA downstream 331065 33437686 ~ 33451270 (+) True AMCG00009320
AMCG00009323 mRNA downstream 409316 33515937 ~ 33520985 (+) True AMCG00009323
AMCG00009324 mRNA downstream 427753 33534374 ~ 33577599 (+) True AMCG00009324
AMCG00009329 mRNA downstream 884987 33991608 ~ 34001073 (+) True AMCG00009329
TU70069 other upstream 941005 32161760 ~ 32165365 (+) True G56060
TU69474 other upstream 3110932 29995126 ~ 29995438 (+) True G55591
TU69455 other upstream 3194806 29907911 ~ 29911564 (+) True G55573
TU69299 other upstream 3931670 29173139 ~ 29174700 (+) True AMCG00009220
TU69269 other upstream 3999462 29103640 ~ 29106908 (+) False AMCG00009208
TU70453 other downstream 894175 34000796 ~ 34031445 (+) True G56368
TU70456 other downstream 909049 34015670 ~ 34018815 (+) True G56369
TU70668 other downstream 2282293 35388914 ~ 35389327 (+) True G56536
TU70945 other downstream 4253480 37360101 ~ 37367671 (+) True AMCG00009405
TU71113 other downstream 4503722 37610343 ~ 37616283 (+) False AMCG00009428

Expression Profile