RNA id: TU70350



Basic Information


Item Value
RNA id TU70350
length 282
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G56282
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 33456891 ~ 33457172 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ggatgacccaaaacacacagctaaaagcacccaagaatggataagaatgaaacattggactgttctgaagtggacttctatgagtcctgatctgaatcctatcgaacatctatggaaagagctgaaacttgcagtctggagaagcacccatcaaacctgagacagctgcagccatttgctcaggaagagtgggccaaactacctgttaacaggtacagaagtctcattgagagctacagaaaatgttagaTTGCAGTGATTGACATtgatattaggttgagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU70333 lncRNA upstream 175127 33281537 ~ 33281764 (+) True G56268
TU70327 lncRNA upstream 346872 33109739 ~ 33110019 (+) True G56262
TU70326 lncRNA upstream 350270 33106370 ~ 33106621 (+) True G56261
TU70257 lncRNA upstream 505925 32948137 ~ 32950966 (+) False G56211
TU70258 lncRNA upstream 505925 32948137 ~ 32950966 (+) True G56211
TU70463 lncRNA downstream 580962 34038134 ~ 34042259 (+) True G56376
TU70484 lncRNA downstream 588318 34045490 ~ 34078839 (+) True G56379
TU70574 lncRNA downstream 906327 34363499 ~ 34368674 (+) False AMCG00009345
TU70575 lncRNA downstream 906327 34363499 ~ 34366719 (+) False AMCG00009345
TU70601 lncRNA downstream 1125775 34582947 ~ 34662345 (+) True G56474
AMCG00009320 mRNA upstream 5621 33437686 ~ 33451270 (+) True AMCG00009320
AMCG00009319 mRNA upstream 199080 33256469 ~ 33257811 (+) True AMCG00009319
AMCG00009317 mRNA upstream 401403 33050004 ~ 33055488 (+) True AMCG00009317
AMCG00009318 mRNA upstream 440320 33005975 ~ 33016571 (+) True AMCG00009318
AMCG00009313 mRNA upstream 533453 32907934 ~ 32923438 (+) True AMCG00009313
AMCG00009323 mRNA downstream 58765 33515937 ~ 33520985 (+) True AMCG00009323
AMCG00009324 mRNA downstream 77202 33534374 ~ 33577599 (+) True AMCG00009324
AMCG00009329 mRNA downstream 534436 33991608 ~ 34001073 (+) True AMCG00009329
AMCG00009330 mRNA downstream 544351 34001523 ~ 34005647 (+) True AMCG00009330
AMCG00009334 mRNA downstream 606392 34063564 ~ 34068571 (+) True AMCG00009334
TU70069 other upstream 1291526 32161760 ~ 32165365 (+) True G56060
TU69474 other upstream 3461453 29995126 ~ 29995438 (+) True G55591
TU69455 other upstream 3545327 29907911 ~ 29911564 (+) True G55573
TU69299 other upstream 4282191 29173139 ~ 29174700 (+) True AMCG00009220
TU69269 other upstream 4349983 29103640 ~ 29106908 (+) False AMCG00009208
TU70453 other downstream 543624 34000796 ~ 34031445 (+) True G56368
TU70456 other downstream 558498 34015670 ~ 34018815 (+) True G56369
TU70668 other downstream 1931742 35388914 ~ 35389327 (+) True G56536
TU70945 other downstream 3902929 37360101 ~ 37367671 (+) True AMCG00009405
TU71113 other downstream 4153171 37610343 ~ 37616283 (+) False AMCG00009428

Expression Profile