RNA id: TU70456



Basic Information


Item Value
RNA id TU70456
length 447
RNA type TUCP
GC content 0.46
exon number 3
gene id G56369
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 34015670 ~ 34018815 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TCAaaatttaattacatacaaacgATTTATCTTTTCCGTACCTACTGGATTTGCACAGTTCAGCTTTTACAAATGCTGTTGGAAAAAGAGGAGCAAATTTTATGACCAAAAAATAGATGTGAAAATGTTCCTGTCTGCAATTCCTCTAAGGTTGCCCTTACATCTCCGCACGGCGGATGGGGTGGGCTTCACGGGCTCCCCggtcttcctcttcctcctcgtcctcctcatAGTTCTCTTCTTCATTTACTTCAGACTCTCGTTTTGGCTGCTCTTCTGCAGGGAGTTTTTCTTCCTTCTGTGGACCTTCATGAGCCTTCACATCTtcTTGTTCGTCGTTCTCTTCGTTGTACGGGTCTTCTtcattcctctccctctcttgcttATGTTCTTCTGGCAAGTCATCCTGGCCctcctcctctccctcctcctggTACTGTTCATCCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU70350 lncRNA upstream 558498 33456891 ~ 33457172 (+) True G56282
TU70333 lncRNA upstream 733906 33281537 ~ 33281764 (+) True G56268
TU70327 lncRNA upstream 905651 33109739 ~ 33110019 (+) True G56262
TU70326 lncRNA upstream 909049 33106370 ~ 33106621 (+) True G56261
TU70258 lncRNA upstream 1064704 32948137 ~ 32950966 (+) True G56211
TU70463 lncRNA downstream 19319 34038134 ~ 34042259 (+) True G56376
TU70484 lncRNA downstream 26675 34045490 ~ 34078839 (+) True G56379
TU70574 lncRNA downstream 344684 34363499 ~ 34368674 (+) False AMCG00009345
TU70575 lncRNA downstream 344684 34363499 ~ 34366719 (+) False AMCG00009345
TU70601 lncRNA downstream 564132 34582947 ~ 34662345 (+) True G56474
AMCG00009330 mRNA upstream 10023 34001523 ~ 34005647 (+) True AMCG00009330
AMCG00009329 mRNA upstream 14597 33991608 ~ 34001073 (+) True AMCG00009329
AMCG00009324 mRNA upstream 438071 33534374 ~ 33577599 (+) True AMCG00009324
AMCG00009323 mRNA upstream 494685 33515937 ~ 33520985 (+) True AMCG00009323
AMCG00009320 mRNA upstream 564400 33437686 ~ 33451270 (+) True AMCG00009320
AMCG00009334 mRNA downstream 44749 34063564 ~ 34068571 (+) True AMCG00009334
AMCG00009337 mRNA downstream 61679 34080494 ~ 34090966 (+) True AMCG00009337
AMCG00009338 mRNA downstream 73911 34092726 ~ 34108014 (+) True AMCG00009338
AMCG00009336 mRNA downstream 100271 34119086 ~ 34121611 (+) True AMCG00009336
AMCG00009335 mRNA downstream 106214 34125029 ~ 34133695 (+) True AMCG00009335
TU70069 other upstream 1850305 32161760 ~ 32165365 (+) True G56060
TU69474 other upstream 4020232 29995126 ~ 29995438 (+) True G55591
TU69455 other upstream 4104106 29907911 ~ 29911564 (+) True G55573
TU69299 other upstream 4840970 29173139 ~ 29174700 (+) True AMCG00009220
TU69269 other upstream 4908762 29103640 ~ 29106908 (+) False AMCG00009208
TU70668 other downstream 1370099 35388914 ~ 35389327 (+) True G56536
TU70945 other downstream 3341286 37360101 ~ 37367671 (+) True AMCG00009405
TU71113 other downstream 3591528 37610343 ~ 37616283 (+) False AMCG00009428
TU71381 other downstream 4423440 38442255 ~ 38457592 (+) True G57105
TU71670 other downstream 5416085 39434900 ~ 39436995 (+) True AMCG00009480

Expression Profile