RNA id: TU70625



Basic Information


Item Value
RNA id TU70625
length 224
lncRNA type inter_gene
GC content 0.39
exon number 2
gene id G56495
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 34962754 ~ 34963224 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCACTCGAAAGGCAGTTCAGAAAGGAAAGCCAGTCTGTTGCTATGACTGCATACAGTGTGCAGCAGGAGAGATCAGCAACACTACAGATTCGAATGACTGTATCCAGTGTCCAGAGGAATATTGGTCCAATGAGAAAAgagataaatgtgttttaaaaataactgaatttctGAACTATTGTGAAATCATGGGAATATTGCTCAGTATTTTCTCTTTAGCTGGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU70601 lncRNA upstream 300409 34582947 ~ 34662345 (+) True G56474
TU70574 lncRNA upstream 594080 34363499 ~ 34368674 (+) False AMCG00009345
TU70575 lncRNA upstream 596035 34363499 ~ 34366719 (+) False AMCG00009345
TU70484 lncRNA upstream 883915 34045490 ~ 34078839 (+) True G56379
TU70463 lncRNA upstream 920495 34038134 ~ 34042259 (+) True G56376
TU70631 lncRNA downstream 57010 35020234 ~ 35067229 (+) True G56501
TU70674 lncRNA downstream 575663 35538887 ~ 35539780 (+) False G56541
TU70675 lncRNA downstream 575663 35538887 ~ 35539780 (+) False G56541
TU70676 lncRNA downstream 575663 35538887 ~ 35539780 (+) False G56541
TU70677 lncRNA downstream 575663 35538887 ~ 35539807 (+) True G56541
AMCG00009370 mRNA upstream 22127 34936048 ~ 34940627 (+) True AMCG00009370
AMCG00009369 mRNA upstream 76808 34867644 ~ 34885946 (+) True AMCG00009369
AMCG00009368 mRNA upstream 97114 34844468 ~ 34865640 (+) True AMCG00009368
AMCG00009367 mRNA upstream 177777 34784678 ~ 34784977 (+) True AMCG00009367
AMCG00009359 mRNA upstream 220795 34741233 ~ 34741959 (+) True AMCG00009359
AMCG00009371 mRNA downstream 99714 35062938 ~ 35066332 (+) True AMCG00009371
AMCG00009372 mRNA downstream 122250 35085474 ~ 35092886 (+) True AMCG00009372
AMCG00009375 mRNA downstream 882746 35845970 ~ 35846681 (+) True AMCG00009375
AMCG00009377 mRNA downstream 1241586 36204810 ~ 36205884 (+) True AMCG00009377
AMCG00009376 mRNA downstream 1242661 36205885 ~ 36206498 (+) True AMCG00009376
TU70453 other upstream 931309 34000796 ~ 34031445 (+) True G56368
TU70456 other upstream 943939 34015670 ~ 34018815 (+) True G56369
TU70069 other upstream 2797389 32161760 ~ 32165365 (+) True G56060
TU69474 other upstream 4967316 29995126 ~ 29995438 (+) True G55591
TU69455 other upstream 5051190 29907911 ~ 29911564 (+) True G55573
TU70668 other downstream 425690 35388914 ~ 35389327 (+) True G56536
TU70945 other downstream 2396877 37360101 ~ 37367671 (+) True AMCG00009405
TU71113 other downstream 2647119 37610343 ~ 37616283 (+) False AMCG00009428
TU71381 other downstream 3479031 38442255 ~ 38457592 (+) True G57105
TU71670 other downstream 4471676 39434900 ~ 39436995 (+) True AMCG00009480

Expression Profile