RNA id: TU70664


Basic Information

Item Value
RNA id TU70664
length 311
lncRNA type inter_gene
GC content 0.58
exon number 1
gene id G56532
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 35358340 ~ 35358650 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gatgagtgactgaaggtagcttggtgcagtgtggtcgagacagcggtaggtgagggtcagtgtcttgaactgaatgcgtgccggtatcgggagccagtggagggagcggagctgtggagtagcgtgtgcgaatcatgGTAGAGAGGTTAACCAgatgagccacagagttctggatgagctggagcgggcaggtagtagttgcaggcaggccggccaggagggagttgcagtagtccaggcgggagaggaccagtgactggacgagcagctgagtcgagtagtcggtgaggaagggacggatttgtatgttg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU70654 lncRNA downstream 9413 35348444 ~ 35348927 (-) True G56522
TU70646 lncRNA downstream 185091 35172876 ~ 35173249 (-) True G56515
TU70644 lncRNA downstream 197463 35160591 ~ 35160877 (-) True G56513
TU70572 lncRNA downstream 999302 34357273 ~ 34359038 (-) False AMCG00009347
TU70553 lncRNA downstream 1042332 34239484 ~ 34316008 (-) False G56438
TU70667 lncRNA upstream 17436 35376086 ~ 35376369 (-) True G56535
TU70672 lncRNA upstream 158442 35517092 ~ 35517526 (-) True G56540
TU70692 lncRNA upstream 232118 35590768 ~ 35591092 (-) True G56549
TU70707 lncRNA upstream 423774 35782424 ~ 35814214 (-) True G56564
TU70714 lncRNA upstream 530800 35889450 ~ 35889682 (-) True G56570
AMCG00009363 mRNA downstream 501873 34844519 ~ 34856467 (-) True AMCG00009363
AMCG00009365 mRNA downstream 525173 34832534 ~ 34833167 (-) True AMCG00009365
AMCG00009364 mRNA downstream 590274 34765834 ~ 34768066 (-) True AMCG00009364
AMCG00009366 mRNA downstream 612550 34745118 ~ 34745790 (-) True AMCG00009366
AMCG00009362 mRNA downstream 657819 34699864 ~ 34700521 (-) True AMCG00009362
AMCG00009373 mRNA upstream 64828 35423478 ~ 35805085 (-) True AMCG00009373
AMCG00009374 mRNA upstream 548562 35907212 ~ 35908512 (-) True AMCG00009374
AMCG00009383 mRNA upstream 1177516 36536166 ~ 36550686 (-) True AMCG00009383
AMCG00009385 mRNA upstream 1217557 36576207 ~ 36576473 (-) True AMCG00009385
AMCG00009384 mRNA upstream 1261756 36620406 ~ 36623497 (-) True AMCG00009384
TU70552 other downstream 1079160 34239484 ~ 34279180 (-) True G56438
TU70548 other downstream 1128951 34227274 ~ 34229389 (-) False AMCG00009342
TU69876 other downstream 4173374 31165011 ~ 31184966 (-) True AMCG00009275
TU69861 other downstream 4372345 30972953 ~ 30985995 (-) True AMCG00009269
TU69860 other downstream 4411129 30944367 ~ 30947211 (-) True G55881
TU70685 other upstream 180237 35538887 ~ 35539810 (-) False G56546
TU70686 other upstream 180237 35538887 ~ 35539810 (-) True G56546
TU70688 other upstream 180237 35538887 ~ 35539810 (-) False G56546
TU70712 other upstream 513473 35872123 ~ 35872597 (-) True G56568
TU70990 other upstream 1857310 37215960 ~ 37220076 (-) True G56800

Expression Profile