RNA id: TU70692


Basic Information

Item Value
RNA id TU70692
length 325
lncRNA type intronic
GC content 0.30
exon number 1
gene id G56549
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 35590768 ~ 35591092 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tcaatttctgtaataattggacgcagacaccaattccaaagatataaattgtcaaatttattcaaaaacaaagactaaatgtagcactacactaattatacaaaagggaaaaactaattaaaattcaactctagatcaacaaatcaaagacaaatcacttccgtgaccaaatcaaagaccatgggattgcatatgataacacacaaatcgttaaacaaaaaaggttataaacacattgactacaataacggttagtaagacgaaggtgagtctctcattagtattgttaatcagacattaaataactacgcaggttagtatttat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU70672 lncRNA downstream 73242 35517092 ~ 35517526 (-) True G56540
TU70667 lncRNA downstream 214399 35376086 ~ 35376369 (-) True G56535
TU70664 lncRNA downstream 232118 35358340 ~ 35358650 (-) True G56532
TU70654 lncRNA downstream 241841 35348444 ~ 35348927 (-) True G56522
TU70646 lncRNA downstream 417519 35172876 ~ 35173249 (-) True G56515
TU70707 lncRNA upstream 191332 35782424 ~ 35814214 (-) True G56564
TU70714 lncRNA upstream 298358 35889450 ~ 35889682 (-) True G56570
TU70757 lncRNA upstream 489543 36080635 ~ 36105419 (-) True G56611
TU70758 lncRNA upstream 505716 36096808 ~ 36393518 (-) True G56612
TU70874 lncRNA upstream 1278456 36869548 ~ 36871823 (-) True G56710
AMCG00009363 mRNA downstream 734301 34844519 ~ 34856467 (-) True AMCG00009363
AMCG00009365 mRNA downstream 757601 34832534 ~ 34833167 (-) True AMCG00009365
AMCG00009364 mRNA downstream 822702 34765834 ~ 34768066 (-) True AMCG00009364
AMCG00009366 mRNA downstream 844978 34745118 ~ 34745790 (-) True AMCG00009366
AMCG00009362 mRNA downstream 890247 34699864 ~ 34700521 (-) True AMCG00009362
AMCG00009374 mRNA upstream 316120 35907212 ~ 35908512 (-) True AMCG00009374
AMCG00009383 mRNA upstream 945074 36536166 ~ 36550686 (-) True AMCG00009383
AMCG00009385 mRNA upstream 985115 36576207 ~ 36576473 (-) True AMCG00009385
AMCG00009384 mRNA upstream 1029314 36620406 ~ 36623497 (-) True AMCG00009384
AMCG00009382 mRNA upstream 1049142 36640234 ~ 36663731 (-) True AMCG00009382
TU70685 other downstream 50958 35538887 ~ 35539810 (-) False G56546
TU70686 other downstream 50958 35538887 ~ 35539810 (-) True G56546
TU70688 other downstream 50958 35538887 ~ 35539810 (-) False G56546
TU70552 other downstream 1311588 34239484 ~ 34279180 (-) True G56438
TU70548 other downstream 1361379 34227274 ~ 34229389 (-) False AMCG00009342
TU70712 other upstream 281031 35872123 ~ 35872597 (-) True G56568
TU70990 other upstream 1624868 37215960 ~ 37220076 (-) True G56800
TU71449 other upstream 2989193 38580285 ~ 38582820 (-) True G57155
TU71520 other upstream 3244224 38835316 ~ 38837564 (-) False AMCG00009472
TU71924 other upstream 4557633 40148725 ~ 40157471 (-) False AMCG00009521

Expression Profile