RNA id: TU70757


Basic Information

Item Value
RNA id TU70757
length 297
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G56611
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 36080635 ~ 36105419 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ggtttgatgtggtcaatgcctttcatgattttgaagacttgaatcaagtccccacatagtctctgttccagggtgaaaaggttcagttccctcagtctctccgagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtacacagtatccagatgagctctaactagtgcattgtacagtcttaacattactgcccttgtttcaaattctacacttttgacaatatacccta

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU70714 lncRNA downstream 190953 35889450 ~ 35889682 (-) True G56570
TU70707 lncRNA downstream 266421 35782424 ~ 35814214 (-) True G56564
TU70692 lncRNA downstream 489543 35590768 ~ 35591092 (-) True G56549
TU70672 lncRNA downstream 563109 35517092 ~ 35517526 (-) True G56540
TU70667 lncRNA downstream 704266 35376086 ~ 35376369 (-) True G56535
TU70874 lncRNA upstream 764129 36869548 ~ 36871823 (-) True G56710
TU70924 lncRNA upstream 1062575 37167994 ~ 37168244 (-) True G56742
TU70983 lncRNA upstream 1095613 37201032 ~ 37267831 (-) False G56795
TU70984 lncRNA upstream 1095613 37201032 ~ 37226002 (-) True G56795
TU71004 lncRNA upstream 1175324 37280743 ~ 37281091 (-) False AMCG00009409
AMCG00009374 mRNA downstream 172123 35907212 ~ 35908512 (-) True AMCG00009374
AMCG00009373 mRNA downstream 275550 35423478 ~ 35805085 (-) True AMCG00009373
AMCG00009363 mRNA downstream 1224168 34844519 ~ 34856467 (-) True AMCG00009363
AMCG00009365 mRNA downstream 1247468 34832534 ~ 34833167 (-) True AMCG00009365
AMCG00009364 mRNA downstream 1312569 34765834 ~ 34768066 (-) True AMCG00009364
AMCG00009383 mRNA upstream 430747 36536166 ~ 36550686 (-) True AMCG00009383
AMCG00009385 mRNA upstream 470788 36576207 ~ 36576473 (-) True AMCG00009385
AMCG00009384 mRNA upstream 514987 36620406 ~ 36623497 (-) True AMCG00009384
AMCG00009382 mRNA upstream 534815 36640234 ~ 36663731 (-) True AMCG00009382
AMCG00009388 mRNA upstream 627760 36733179 ~ 36767720 (-) True AMCG00009388
TU70712 other downstream 208038 35872123 ~ 35872597 (-) True G56568
TU70685 other downstream 540825 35538887 ~ 35539810 (-) False G56546
TU70686 other downstream 540825 35538887 ~ 35539810 (-) True G56546
TU70688 other downstream 540825 35538887 ~ 35539810 (-) False G56546
TU70552 other downstream 1801455 34239484 ~ 34279180 (-) True G56438
TU70990 other upstream 1110541 37215960 ~ 37220076 (-) True G56800
TU71449 other upstream 2474866 38580285 ~ 38582820 (-) True G57155
TU71520 other upstream 2729897 38835316 ~ 38837564 (-) False AMCG00009472
TU71924 other upstream 4043306 40148725 ~ 40157471 (-) False AMCG00009521
TU72548 other upstream 6563708 42669127 ~ 42673707 (-) True G58025

Expression Profile