RNA id: TU70862



Basic Information


Item Value
RNA id TU70862
length 321
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G56698
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 36875078 ~ 36875398 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CGTGGACTCGCGTAGGAATCCGTCATTCCTTCTAGTTACAGgttgttataaaaatataacaaaacgcGAACATTACAACGTGCTGTACAGTGTCTCATATTTCCCAGGATCCGACCCTGCAAAGTTTCGCTCTTAGCAGCCCTGATCGTTGTGCTTGCTCTATAATAAGAGTCTAAGGAAGCAACTGCATGTCCTTGCAAAGAGCGTGCAAAAGGCGAGCAGCTCTCACCCGAAAGGAGGGGCGTCCGGGCTTCAGGCGTGGCTTTGGTGTATTGAAACAAAGGTcgcagcgcagatttccgcagttctgcgcaaaTCTGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU70776 lncRNA upstream 243264 36627195 ~ 36631814 (+) True G56629
TU70777 lncRNA upstream 243264 36627195 ~ 36631814 (+) False G56629
TU70770 lncRNA upstream 395703 36476438 ~ 36479375 (+) True G56623
TU70730 lncRNA upstream 840383 35948851 ~ 36034695 (+) False G56584
TU70728 lncRNA upstream 923096 35927372 ~ 35951982 (+) True G56584
TU70857 lncRNA downstream 24895 36900293 ~ 36975061 (+) True G56694
TU70891 lncRNA downstream 153808 37029206 ~ 37029542 (+) True G56712
TU70929 lncRNA downstream 313170 37188568 ~ 37188778 (+) True G56747
TU70938 lncRNA downstream 318328 37193726 ~ 37195088 (+) True G56754
TU70962 lncRNA downstream 410445 37285843 ~ 37291665 (+) True G56775
AMCG00009387 mRNA upstream 143835 36704289 ~ 36731243 (+) True AMCG00009387
AMCG00009386 mRNA upstream 176962 36690833 ~ 36698116 (+) True AMCG00009386
AMCG00009381 mRNA upstream 263149 36576217 ~ 36611929 (+) True AMCG00009381
AMCG00009379 mRNA upstream 329361 36528946 ~ 36545717 (+) True AMCG00009379
AMCG00009380 mRNA upstream 359352 36515194 ~ 36515726 (+) True AMCG00009380
AMCG00009392 mRNA downstream 33698 36909096 ~ 37086094 (+) True AMCG00009392
AMCG00009393 mRNA downstream 211119 37086517 ~ 37087593 (+) True AMCG00009393
AMCG00009396 mRNA downstream 257831 37133229 ~ 37145082 (+) True AMCG00009396
AMCG00009401 mRNA downstream 309226 37184624 ~ 37192497 (+) True AMCG00009401
AMCG00009399 mRNA downstream 317107 37192505 ~ 37206412 (+) True AMCG00009399
TU70668 other upstream 1485751 35388914 ~ 35389327 (+) True G56536
TU70453 other upstream 2843633 34000796 ~ 34031445 (+) True G56368
TU70456 other upstream 2856263 34015670 ~ 34018815 (+) True G56369
TU70069 other upstream 4709713 32161760 ~ 32165365 (+) True G56060
TU69474 other upstream 6879640 29995126 ~ 29995438 (+) True G55591
TU70945 other downstream 484703 37360101 ~ 37367671 (+) True AMCG00009405
TU71113 other downstream 734945 37610343 ~ 37616283 (+) False AMCG00009428
TU71381 other downstream 1566857 38442255 ~ 38457592 (+) True G57105
TU71670 other downstream 2559502 39434900 ~ 39436995 (+) True AMCG00009480
TU71802 other downstream 3072608 39948006 ~ 39949200 (+) True G57430

Expression Profile