RNA id: TU70924


Basic Information

Item Value
RNA id TU70924
length 251
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G56742
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 37167994 ~ 37168244 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ctcctctgttccagggtgaaaaggttcagttcctcagtctctcagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtccacagtatccagatgagctctaactagtgcattgtacagtctgaacatcactgcccttgttctcaattctacacttttgacaatataccctaacatcctgtttgcc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU70874 lncRNA downstream 296171 36869548 ~ 36871823 (-) True G56710
TU70758 lncRNA downstream 774476 36096808 ~ 36393518 (-) True G56612
TU70757 lncRNA downstream 1062575 36080635 ~ 36105419 (-) True G56611
TU70714 lncRNA downstream 1278312 35889450 ~ 35889682 (-) True G56570
TU70707 lncRNA downstream 1353780 35782424 ~ 35814214 (-) True G56564
TU70983 lncRNA upstream 32788 37201032 ~ 37267831 (-) False G56795
TU70984 lncRNA upstream 32788 37201032 ~ 37226002 (-) True G56795
TU71004 lncRNA upstream 112499 37280743 ~ 37281091 (-) False AMCG00009409
TU71005 lncRNA upstream 112974 37281218 ~ 37285365 (-) False AMCG00009409
TU71007 lncRNA upstream 125648 37293892 ~ 37297002 (-) False AMCG00009408
AMCG00009394 mRNA downstream 70667 37088783 ~ 37097327 (-) True AMCG00009394
AMCG00009390 mRNA downstream 246855 36900293 ~ 36921139 (-) True AMCG00009390
AMCG00009391 mRNA downstream 293265 36873672 ~ 36874729 (-) True AMCG00009391
AMCG00009389 mRNA downstream 327657 36840116 ~ 36840337 (-) True AMCG00009389
AMCG00009388 mRNA downstream 400274 36733179 ~ 36767720 (-) True AMCG00009388
AMCG00009407 mRNA upstream 107218 37275462 ~ 37277549 (-) True AMCG00009407
AMCG00009411 mRNA upstream 110642 37278886 ~ 37279752 (-) True AMCG00009411
AMCG00009409 mRNA upstream 112304 37280548 ~ 37285304 (-) True AMCG00009409
AMCG00009408 mRNA upstream 117332 37285576 ~ 37297182 (-) True AMCG00009408
AMCG00009406 mRNA upstream 132284 37300528 ~ 37305420 (-) True AMCG00009406
TU70712 other downstream 1295397 35872123 ~ 35872597 (-) True G56568
TU70685 other downstream 1628184 35538887 ~ 35539810 (-) False G56546
TU70686 other downstream 1628184 35538887 ~ 35539810 (-) True G56546
TU70688 other downstream 1628184 35538887 ~ 35539810 (-) False G56546
TU70552 other downstream 2888814 34239484 ~ 34279180 (-) True G56438
TU70990 other upstream 47716 37215960 ~ 37220076 (-) True G56800
TU71449 other upstream 1412041 38580285 ~ 38582820 (-) True G57155
TU71520 other upstream 1667072 38835316 ~ 38837564 (-) False AMCG00009472
TU71924 other upstream 2980481 40148725 ~ 40157471 (-) False AMCG00009521
TU72548 other upstream 5500883 42669127 ~ 42673707 (-) True G58025

Expression Profile