RNA id: TU71281



Basic Information


Item Value
RNA id TU71281
length 211
lncRNA type inter_gene
GC content 0.60
exon number 1
gene id G57017
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 38127468 ~ 38127678 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GGATTCTCAGCCGGGTGCTGCCCAACATCGCTGCCCTGCGTACCTGTGTGTCCCGGCAGCTCTCTGGTGACACGCACGTTGCCCTCCCTGGTCTTCAGGCTATATATGGAGCAGATGTTGTCCAGACCTCCGCAGGCCACATAGTTGCCAGAGGGCGCGTAGGCACAGGTCATGACCCAGGATGACCTCAGGGGGATGGCATGCATCTAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU71280 lncRNA downstream 128 38125981 ~ 38127340 (-) True G57016
TU71279 lncRNA downstream 2105 38125149 ~ 38125363 (-) True G57015
TU71277 lncRNA downstream 8625 38118428 ~ 38118843 (-) True G57013
TU71208 lncRNA downstream 219897 37906405 ~ 37907571 (-) False AMCG00009437
TU71165 lncRNA downstream 393280 37636705 ~ 37734188 (-) True G56927
TU71282 lncRNA upstream 1306 38128984 ~ 38129202 (-) True G57018
TU71275 lncRNA upstream 1617 38129295 ~ 38133966 (-) True G57011
TU71274 lncRNA upstream 2403 38130081 ~ 38133966 (-) False G57011
TU71435 lncRNA upstream 373440 38501118 ~ 38503129 (-) True G57143
TU71466 lncRNA upstream 505434 38633112 ~ 38633397 (-) True G57165
AMCG00009448 mRNA downstream 21675 38094973 ~ 38105793 (-) True AMCG00009448
AMCG00009447 mRNA downstream 35312 38089356 ~ 38092156 (-) True AMCG00009447
AMCG00009441 mRNA downstream 39344 38063826 ~ 38088124 (-) True AMCG00009441
AMCG00009439 mRNA downstream 173413 37942071 ~ 37954055 (-) True AMCG00009439
AMCG00009440 mRNA downstream 193823 37928306 ~ 37933645 (-) True AMCG00009440
AMCG00009446 mRNA upstream 6405 38134083 ~ 38146947 (-) True AMCG00009446
AMCG00009445 mRNA upstream 28047 38155725 ~ 38176524 (-) True AMCG00009445
AMCG00009451 mRNA upstream 115529 38243207 ~ 38259816 (-) True AMCG00009451
AMCG00009452 mRNA upstream 138521 38266199 ~ 38271710 (-) True AMCG00009452
AMCG00009453 mRNA upstream 151573 38279251 ~ 38281530 (-) True AMCG00009453
TU70990 other downstream 907392 37215960 ~ 37220076 (-) True G56800
TU70712 other downstream 2254871 35872123 ~ 35872597 (-) True G56568
TU70685 other downstream 2587658 35538887 ~ 35539810 (-) False G56546
TU71449 other upstream 452607 38580285 ~ 38582820 (-) True G57155
TU71520 other upstream 707638 38835316 ~ 38837564 (-) False AMCG00009472
TU71924 other upstream 2021047 40148725 ~ 40157471 (-) False AMCG00009521
TU72548 other upstream 4541449 42669127 ~ 42673707 (-) True G58025
TU72928 other upstream 5354743 43482421 ~ 43945297 (-) True G58333

Expression Profile