RNA id: TU71282



Basic Information


Item Value
RNA id TU71282
length 219
lncRNA type inter_gene
GC content 0.62
exon number 1
gene id G57018
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 38128984 ~ 38129202 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CACCTGCACGCTCTCCCTTCAGGGTGTCCCACACGTTGCAGTTGAAGTCGTCGTAGCCAGCGAGCAGCAGGCGGCCGCTCTTAGAGAAGGCCACGGAGGTGATGCCGCAGATTATGTTGTCGTGGGAGTACATCATCAGCTCCTGGTCCGCCCGCAGGTCGAACAGCCGGCATGTGGCGTCGTCCGAGCCCGTGGTGAAGGCGTTTCCGTTGGGGAAGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU71281 lncRNA downstream 1306 38127468 ~ 38127678 (-) True G57017
TU71280 lncRNA downstream 1644 38125981 ~ 38127340 (-) True G57016
TU71279 lncRNA downstream 3621 38125149 ~ 38125363 (-) True G57015
TU71277 lncRNA downstream 10141 38118428 ~ 38118843 (-) True G57013
TU71208 lncRNA downstream 221413 37906405 ~ 37907571 (-) False AMCG00009437
TU71275 lncRNA upstream 93 38129295 ~ 38133966 (-) True G57011
TU71274 lncRNA upstream 879 38130081 ~ 38133966 (-) False G57011
TU71435 lncRNA upstream 371916 38501118 ~ 38503129 (-) True G57143
TU71466 lncRNA upstream 503910 38633112 ~ 38633397 (-) True G57165
TU71506 lncRNA upstream 643224 38772426 ~ 38773951 (-) True G57194
AMCG00009448 mRNA downstream 23191 38094973 ~ 38105793 (-) True AMCG00009448
AMCG00009447 mRNA downstream 36828 38089356 ~ 38092156 (-) True AMCG00009447
AMCG00009441 mRNA downstream 40860 38063826 ~ 38088124 (-) True AMCG00009441
AMCG00009439 mRNA downstream 174929 37942071 ~ 37954055 (-) True AMCG00009439
AMCG00009440 mRNA downstream 195339 37928306 ~ 37933645 (-) True AMCG00009440
AMCG00009446 mRNA upstream 4881 38134083 ~ 38146947 (-) True AMCG00009446
AMCG00009445 mRNA upstream 26523 38155725 ~ 38176524 (-) True AMCG00009445
AMCG00009451 mRNA upstream 114005 38243207 ~ 38259816 (-) True AMCG00009451
AMCG00009452 mRNA upstream 136997 38266199 ~ 38271710 (-) True AMCG00009452
AMCG00009453 mRNA upstream 150049 38279251 ~ 38281530 (-) True AMCG00009453
TU70990 other downstream 908908 37215960 ~ 37220076 (-) True G56800
TU70712 other downstream 2256387 35872123 ~ 35872597 (-) True G56568
TU70685 other downstream 2589174 35538887 ~ 35539810 (-) False G56546
TU71449 other upstream 451083 38580285 ~ 38582820 (-) True G57155
TU71520 other upstream 706114 38835316 ~ 38837564 (-) False AMCG00009472
TU71924 other upstream 2019523 40148725 ~ 40157471 (-) False AMCG00009521
TU72548 other upstream 4539925 42669127 ~ 42673707 (-) True G58025
TU72928 other upstream 5353219 43482421 ~ 43945297 (-) True G58333

Expression Profile