RNA id: TU73069


Basic Information

Item Value
RNA id TU73069
length 380
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G58456
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44109336 ~ 44109715 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCACAGTGATGGGGATGAAGTTGCTGAGAGCAGATGAGACGTTCACTCCGTTGATCTTCACTCGGTACAGACAGCTGTAGCCACCCTGGTGAGACGTGTCCACTCGCTCCACGGTCAGCTCCACTTTCTTCTTCAGGGCTAGGGCCCTCTTGGTCTCGATGGGGTTCCCAACTCCGCTCCTGTACCAGTCAAACTCCAAGCTGGTGTAGACGGCGGAGGGGGCCGTGCAGCTGAACCGGATCGTGTCTCCAGGTAAGACGGAAAGGTGACGAGAGAGCAGGGAGATGATGGGTCTCTCTGGCACCTCTGCTAAGGGTTACATAAGAAACCTGAAACTTACACTTAACACCGAGGGTCTGGAACATAAAAGTGTAAcagat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73065 lncRNA downstream 4626 44097276 ~ 44104710 (-) True G58452
TU73002 lncRNA downstream 131850 43977285 ~ 43977486 (-) True G58395
TU73001 lncRNA downstream 136706 43972264 ~ 43972630 (-) True G58394
TU72997 lncRNA downstream 161814 43938921 ~ 43947522 (-) True G58391
TU72982 lncRNA downstream 233597 43873781 ~ 43875739 (-) True G58377
TU73070 lncRNA upstream 254 44109969 ~ 44110283 (-) True G58457
TU73073 lncRNA upstream 5935 44115650 ~ 44121067 (-) True G58459
TU73143 lncRNA upstream 215442 44325157 ~ 44325573 (-) True G58511
TU73196 lncRNA upstream 371337 44481052 ~ 44488354 (-) True G58548
TU73197 lncRNA upstream 371337 44481052 ~ 44526239 (-) False G58548
AMCG00009678 mRNA downstream 35220 44073850 ~ 44074116 (-) True AMCG00009678
AMCG00009677 mRNA downstream 44869 44051410 ~ 44064467 (-) True AMCG00009677
AMCG00009671 mRNA downstream 102533 43996712 ~ 44006803 (-) True AMCG00009671
AMCG00009672 mRNA downstream 114488 43991714 ~ 43994848 (-) False AMCG00009672
AMCG00009664 mRNA downstream 173578 43933227 ~ 43935758 (-) True AMCG00009664
AMCG00009683 mRNA upstream 146700 44256415 ~ 44264122 (-) True AMCG00009683
AMCG00009690 mRNA upstream 175163 44284878 ~ 44293118 (-) True AMCG00009690
AMCG00009693 mRNA upstream 214270 44323985 ~ 44328354 (-) True AMCG00009693
AMCG00009692 mRNA upstream 229348 44339063 ~ 44342291 (-) True AMCG00009692
AMCG00009691 mRNA upstream 236755 44346470 ~ 44354753 (-) True AMCG00009691
TU73015 other downstream 113682 43989511 ~ 43995654 (-) True AMCG00009672
TU72928 other downstream 164039 43482421 ~ 43945297 (-) True G58333
TU72548 other downstream 1435629 42669127 ~ 42673707 (-) True G58025
TU71924 other downstream 3951865 40148725 ~ 40157471 (-) False AMCG00009521
TU71520 other downstream 5271772 38835316 ~ 38837564 (-) False AMCG00009472
TU73231 other upstream 398538 44508253 ~ 44512249 (-) False AMCG00009697
TU73235 other upstream 432179 44541894 ~ 44542809 (-) True G58584
TU73240 other upstream 456354 44566069 ~ 44566834 (-) True G58589
TU73318 other upstream 673203 44782918 ~ 44785134 (-) True G58653
TU73631 other upstream 1211128 45320843 ~ 45323950 (-) True AMCG00009748

Expression Profile