RNA id: TU73145


Basic Information

Item Value
RNA id TU73145
length 246
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G58513
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44328271 ~ 44360062 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTGGTATTTCAGAAACATCACAAAAGCACCCTGTAGGATACAGAGAACGGCCAGCGAGATCATCTTCACCCGGTACAGATACATCTTGCATCCTTCTCTGGTCTGGGCTGAGGAACCTGCAGGGCTGTTCCCCTCTGCCGGTTTGTGTGGCATCTCCTCCAGCTCCATCGAGTTCTGAACAGAGCAGCTGAGCTCCCAAGATAGACTGAGACTCTCACAGGACCCTCACCGTAAGTCGGACTCATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73142 lncRNA upstream 2698 44325151 ~ 44325573 (+) True G58510
TU73083 lncRNA upstream 158482 44169485 ~ 44169789 (+) True G58467
TU72912 lncRNA upstream 401640 43921474 ~ 43926631 (+) True G58319
TU72908 lncRNA upstream 412511 43909588 ~ 43915760 (+) True G58317
TU72891 lncRNA upstream 452548 43873781 ~ 43875723 (+) True G58304
TU73158 lncRNA downstream 26435 44386497 ~ 44390082 (+) True G58522
TU73159 lncRNA downstream 26435 44386497 ~ 44407568 (+) False G58522
TU73169 lncRNA downstream 53210 44413272 ~ 44483247 (+) True G58527
TU73281 lncRNA downstream 399215 44759277 ~ 44760058 (+) False AMCG00009706
TU73337 lncRNA downstream 532783 44892845 ~ 44893078 (+) True G58666
AMCG00009686 mRNA upstream 5474 44314972 ~ 44322797 (+) True AMCG00009686
AMCG00009687 mRNA upstream 14122 44303226 ~ 44314149 (+) True AMCG00009687
AMCG00009680 mRNA upstream 47084 44265059 ~ 44281187 (+) True AMCG00009680
AMCG00009682 mRNA upstream 74224 44235551 ~ 44254047 (+) True AMCG00009682
AMCG00009684 mRNA upstream 106058 44221359 ~ 44222213 (+) True AMCG00009684
AMCG00009685 mRNA downstream 4469 44364531 ~ 44372415 (+) True AMCG00009685
AMCG00009688 mRNA downstream 13639 44373701 ~ 44381036 (+) True AMCG00009688
AMCG00009689 mRNA downstream 22495 44382557 ~ 44386172 (+) True AMCG00009689
AMCG00009698 mRNA downstream 79512 44439574 ~ 44442056 (+) True AMCG00009698
AMCG00009696 mRNA downstream 90041 44450103 ~ 44482061 (+) True AMCG00009696
TU72919 other upstream 392509 43932952 ~ 43935762 (+) True G58324
TU72303 other upstream 2250030 42036018 ~ 42078241 (+) True G57830
TU72035 other upstream 3333612 40990802 ~ 40994659 (+) True G57604
TU71881 other upstream 4223323 40102383 ~ 40104948 (+) False AMCG00009516
TU71802 other upstream 4379071 39948006 ~ 39949200 (+) True G57430
TU73161 other downstream 26435 44386497 ~ 44387964 (+) False G58522
TU73232 other downstream 207303 44567365 ~ 44570531 (+) True AMCG00009694
TU73244 other downstream 224500 44584562 ~ 44599328 (+) False AMCG00009700
TU73251 other downstream 272688 44632750 ~ 44651967 (+) True G58600
TU73437 other downstream 696003 45056065 ~ 45057874 (+) True G58747

Expression Profile