RNA id: TU73256


Basic Information

Item Value
RNA id TU73256
length 404
lncRNA type inter_gene
GC content 0.68
exon number 3
gene id G58605
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44658416 ~ 44659098 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GACCCCCAGTATCAGCAAGGTCCGCCCTGACCGAGGGCCGGTGTCGGGGGGCACGCGACTCACCATTTCGGGGCGACACCTGGACGCCGGCAGCCTGGTCACGGTGTTCGTGGGCCCCGGAGAGTGCCAGTTCATCAGGCGGACGGTCCGGGACATCGCGTGCGTGACGCCCCCCTCTgcggccgggccgggccgggccacCATCAAGCTGTACATCGACAAGGCCGAGGTCACGAGTCCGGACACGCGGTTCCTGTACACGGAGGATCCCACGGTCACGGCCATCGACCCCGGCTGGAGCATCGTCAACGGCAGCACGCCCATCACCATTACCGGCACCAACCTGCTGACCATCCAGGAGCCCAAAGTGCGCGCCAAGTACGGAGGGGTGGAGACGACCAACG

Function

GO:

id name namespace
GO:0048729 tissue morphogenesis biological_process
GO:0048731 system development biological_process
GO:0055008 cardiac muscle tissue morphogenesis biological_process
GO:0060415 muscle tissue morphogenesis biological_process
GO:0007275 multicellular organism development biological_process
GO:0009888 tissue development biological_process
GO:0072175 epithelial tube formation biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0048856 anatomical structure development biological_process
GO:0001838 embryonic epithelial tube formation biological_process
GO:0001841 neural tube formation biological_process
GO:0048644 muscle organ morphogenesis biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73236 lncRNA downstream 115239 44542943 ~ 44543177 (-) True G58585
TU73197 lncRNA downstream 132177 44481052 ~ 44526239 (-) False G58548
TU73196 lncRNA downstream 170062 44481052 ~ 44488354 (-) True G58548
TU73143 lncRNA downstream 332843 44325157 ~ 44325573 (-) True G58511
TU73073 lncRNA downstream 537349 44115650 ~ 44121067 (-) True G58459
TU73263 lncRNA upstream 2783 44661881 ~ 44662333 (-) True G58611
TU73264 lncRNA upstream 5640 44664738 ~ 44664945 (-) True G58612
TU73265 lncRNA upstream 6024 44665122 ~ 44665331 (-) True G58613
TU73319 lncRNA upstream 126506 44785604 ~ 44786772 (-) True G58654
TU73386 lncRNA upstream 233694 44892792 ~ 44893083 (-) True G58699
AMCG00009705 mRNA downstream 692 44656044 ~ 44657724 (-) True AMCG00009705
AMCG00009704 mRNA downstream 3802 44653851 ~ 44654614 (-) True AMCG00009704
AMCG00009697 mRNA downstream 146314 44501787 ~ 44512102 (-) True AMCG00009697
AMCG00009691 mRNA downstream 303663 44346470 ~ 44354753 (-) True AMCG00009691
AMCG00009692 mRNA downstream 316125 44339063 ~ 44342291 (-) True AMCG00009692
AMCG00009710 mRNA upstream 23566 44682664 ~ 44693533 (-) True AMCG00009710
AMCG00009713 mRNA upstream 130032 44789130 ~ 44808487 (-) True AMCG00009713
AMCG00009718 mRNA upstream 262991 44922089 ~ 44927038 (-) True AMCG00009718
AMCG00009717 mRNA upstream 310864 44969962 ~ 44976755 (-) True AMCG00009717
AMCG00009723 mRNA upstream 371819 45030917 ~ 45032715 (-) True AMCG00009723
TU73240 other downstream 91582 44566069 ~ 44566834 (-) True G58589
TU73235 other downstream 115607 44541894 ~ 44542809 (-) True G58584
TU73231 other downstream 146167 44508253 ~ 44512249 (-) False AMCG00009697
TU73015 other downstream 662762 43989511 ~ 43995654 (-) True AMCG00009672
TU72928 other downstream 713119 43482421 ~ 43945297 (-) True G58333
TU73318 other upstream 123820 44782918 ~ 44785134 (-) True G58653
TU73631 other upstream 661745 45320843 ~ 45323950 (-) True AMCG00009748
TU73632 other upstream 661745 45320843 ~ 45323322 (-) False AMCG00009748

Expression Profile