RNA id: TU73263


Basic Information

Item Value
RNA id TU73263
length 453
lncRNA type inter_gene
GC content 0.64
exon number 1
gene id G58611
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44661881 ~ 44662333 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATCGGCCTGGGGCCTCTGGGAGTAGGGGATGCCCTTGTACACGGCGTCCAGCAGCTTGTCCTTCACCTGGGTTACGGTGTCGCAGTTCAGCACCTTGACGGGCACCTCGCTGCCGGCCTCCCCCTCGGGGGGGATGCACATGAGCGTCTGGGTGACGGGGAGCAGAGAGGGACACGTTAATACGCGAGACAGACGCACAGTACACACGGGACAGTGTGTTGTGGCCTGGCGGTGGTGGAGACGCCCTGCGTGACTGTGACTGCATGGCACCGGACAGGTACATGGGGGAGTCCCGGACCACAGCGCTGGCGTTGTCCCGGGCTGGTGTCACCACCAGTGCCGTTCACTGCCGCGTCCCGTGACCCTCCAGCCAATCGGTGGCGCGGCACAGACGTGGCTCAGCCGGTGAATAAACATGATACTGGTGCGCGTGCTCGGAGCGCTAATCAGATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73256 lncRNA downstream 2783 44658416 ~ 44659098 (-) True G58605
TU73236 lncRNA downstream 118704 44542943 ~ 44543177 (-) True G58585
TU73197 lncRNA downstream 135642 44481052 ~ 44526239 (-) False G58548
TU73196 lncRNA downstream 173527 44481052 ~ 44488354 (-) True G58548
TU73143 lncRNA downstream 336308 44325157 ~ 44325573 (-) True G58511
TU73264 lncRNA upstream 2405 44664738 ~ 44664945 (-) True G58612
TU73265 lncRNA upstream 2789 44665122 ~ 44665331 (-) True G58613
TU73319 lncRNA upstream 123271 44785604 ~ 44786772 (-) True G58654
TU73386 lncRNA upstream 230459 44892792 ~ 44893083 (-) True G58699
TU73394 lncRNA upstream 254298 44916631 ~ 44916889 (-) True G58707
AMCG00009705 mRNA downstream 4157 44656044 ~ 44657724 (-) True AMCG00009705
AMCG00009704 mRNA downstream 7267 44653851 ~ 44654614 (-) True AMCG00009704
AMCG00009697 mRNA downstream 149779 44501787 ~ 44512102 (-) True AMCG00009697
AMCG00009691 mRNA downstream 307128 44346470 ~ 44354753 (-) True AMCG00009691
AMCG00009692 mRNA downstream 319590 44339063 ~ 44342291 (-) True AMCG00009692
AMCG00009710 mRNA upstream 20331 44682664 ~ 44693533 (-) True AMCG00009710
AMCG00009713 mRNA upstream 126797 44789130 ~ 44808487 (-) True AMCG00009713
AMCG00009718 mRNA upstream 259756 44922089 ~ 44927038 (-) True AMCG00009718
AMCG00009717 mRNA upstream 307629 44969962 ~ 44976755 (-) True AMCG00009717
AMCG00009723 mRNA upstream 368584 45030917 ~ 45032715 (-) True AMCG00009723
TU73240 other downstream 95047 44566069 ~ 44566834 (-) True G58589
TU73235 other downstream 119072 44541894 ~ 44542809 (-) True G58584
TU73231 other downstream 149632 44508253 ~ 44512249 (-) False AMCG00009697
TU73015 other downstream 666227 43989511 ~ 43995654 (-) True AMCG00009672
TU72928 other downstream 716584 43482421 ~ 43945297 (-) True G58333
TU73318 other upstream 120585 44782918 ~ 44785134 (-) True G58653
TU73631 other upstream 658510 45320843 ~ 45323950 (-) True AMCG00009748
TU73632 other upstream 658510 45320843 ~ 45323322 (-) False AMCG00009748

Expression Profile