RNA id: TU73337



Basic Information


Item Value
RNA id TU73337
length 234
lncRNA type inter_gene
GC content 0.58
exon number 1
gene id G58666
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44892845 ~ 44893078 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tgcaggcaggccggccaggagggagttgcagtagtccaggcgggacaggaccagtgactggacgagtagctgagttgagtagtcggtgaggaagggacggatccggcgtatgttgctcaggaagaatctgcaggtgcgcgtcagcgtggtgatgtgctgggagaaggagagcgcaggatcgagggtgactcctagatttttagcggaagaagaaggagagagtgtggtggattc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73281 lncRNA upstream 132787 44759277 ~ 44760058 (+) False AMCG00009706
TU73169 lncRNA upstream 409598 44413272 ~ 44483247 (+) True G58527
TU73159 lncRNA upstream 485277 44386497 ~ 44407568 (+) False G58522
TU73158 lncRNA upstream 502763 44386497 ~ 44390082 (+) True G58522
TU73145 lncRNA upstream 532783 44328271 ~ 44360062 (+) True G58513
TU73326 lncRNA downstream 24965 44918043 ~ 44921637 (+) True G58660
TU73340 lncRNA downstream 29006 44922084 ~ 44923700 (+) True G58668
TU73472 lncRNA downstream 250097 45143175 ~ 45143472 (+) True G58776
TU73492 lncRNA downstream 301445 45194523 ~ 45198264 (+) True G58792
TU73541 lncRNA downstream 373861 45266939 ~ 45275033 (+) True G58825
AMCG00009712 mRNA upstream 11120 44856527 ~ 44881725 (+) True AMCG00009712
AMCG00009709 mRNA upstream 111877 44768874 ~ 44780968 (+) True AMCG00009709
AMCG00009707 mRNA upstream 124617 44764036 ~ 44768228 (+) True AMCG00009707
AMCG00009706 mRNA upstream 133033 44750176 ~ 44759812 (+) True AMCG00009706
AMCG00009708 mRNA upstream 146516 44738679 ~ 44746329 (+) True AMCG00009708
AMCG00009714 mRNA downstream 8348 44901426 ~ 44916843 (+) True AMCG00009714
AMCG00009715 mRNA downstream 34789 44927867 ~ 44933814 (+) True AMCG00009715
AMCG00009716 mRNA downstream 57595 44950673 ~ 44962284 (+) True AMCG00009716
AMCG00009719 mRNA downstream 73801 44966879 ~ 44969079 (+) True AMCG00009719
AMCG00009722 mRNA downstream 82582 44975660 ~ 44984837 (+) True AMCG00009722
TU73251 other upstream 240878 44632750 ~ 44651967 (+) True G58600
TU73244 other upstream 293517 44584562 ~ 44599328 (+) False AMCG00009700
TU73232 other upstream 322314 44567365 ~ 44570531 (+) True AMCG00009694
TU73161 other upstream 504881 44386497 ~ 44387964 (+) False G58522
TU72919 other upstream 957083 43932952 ~ 43935762 (+) True G58324
TU73437 other downstream 162987 45056065 ~ 45057874 (+) True G58747
TU73602 other downstream 615116 45508194 ~ 45509104 (+) False AMCG00009761
TU73611 other downstream 666899 45559977 ~ 45571635 (+) True AMCG00009759
TU73851 other downstream 861508 45754586 ~ 45755115 (+) True G59084

Expression Profile