RNA id: TU73472



Basic Information


Item Value
RNA id TU73472
length 298
lncRNA type intronic
GC content 0.49
exon number 1
gene id G58776
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45143175 ~ 45143472 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


caaggatcctatccagtctgtttttgaatgttcccaaattgtctcttcagccacatcgctggggagtttgttcagattgtgacgcctctctgtgtgaagaagtgtctcctgttttctgtctcgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgagaaggttcaggtcctcagtctctc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73340 lncRNA upstream 219475 44922084 ~ 44923700 (+) True G58668
TU73326 lncRNA upstream 221538 44918043 ~ 44921637 (+) True G58660
TU73337 lncRNA upstream 250097 44892845 ~ 44893078 (+) True G58666
TU73281 lncRNA upstream 383117 44759277 ~ 44760058 (+) False AMCG00009706
TU73169 lncRNA upstream 659928 44413272 ~ 44483247 (+) True G58527
TU73492 lncRNA downstream 51051 45194523 ~ 45198264 (+) True G58792
TU73541 lncRNA downstream 123467 45266939 ~ 45275033 (+) True G58825
TU73548 lncRNA downstream 133016 45276488 ~ 45277596 (+) True G58830
TU73535 lncRNA downstream 186312 45329784 ~ 45332856 (+) True G58822
TU73534 lncRNA downstream 196133 45339605 ~ 45398453 (+) True G58821
AMCG00009731 mRNA upstream 6317 45135424 ~ 45136858 (+) True AMCG00009731
AMCG00009727 mRNA upstream 23989 45115663 ~ 45119186 (+) True AMCG00009727
AMCG00009728 mRNA upstream 31343 45105536 ~ 45111832 (+) True AMCG00009728
AMCG00009730 mRNA upstream 49937 45089203 ~ 45093238 (+) True AMCG00009730
AMCG00009721 mRNA upstream 111395 45005169 ~ 45031780 (+) True AMCG00009721
AMCG00009738 mRNA downstream 31694 45175166 ~ 45184732 (+) True AMCG00009738
AMCG00009737 mRNA downstream 43748 45187220 ~ 45188112 (+) True AMCG00009737
AMCG00009735 mRNA downstream 69095 45212567 ~ 45220687 (+) True AMCG00009735
AMCG00009734 mRNA downstream 92695 45236167 ~ 45241904 (+) True AMCG00009734
AMCG00009736 mRNA downstream 108463 45251935 ~ 45254181 (+) True AMCG00009736
TU73437 other upstream 85301 45056065 ~ 45057874 (+) True G58747
TU73251 other upstream 491208 44632750 ~ 44651967 (+) True G58600
TU73244 other upstream 543847 44584562 ~ 44599328 (+) False AMCG00009700
TU73232 other upstream 572644 44567365 ~ 44570531 (+) True AMCG00009694
TU73161 other upstream 755211 44386497 ~ 44387964 (+) False G58522
TU73602 other downstream 364722 45508194 ~ 45509104 (+) False AMCG00009761
TU73611 other downstream 416505 45559977 ~ 45571635 (+) True AMCG00009759
TU73851 other downstream 611114 45754586 ~ 45755115 (+) True G59084

Expression Profile