RNA id: TU73711



Basic Information


Item Value
RNA id TU73711
length 507
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G58971
representative False

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45584758 ~ 45585330 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gagggaggggactaatgcatgattgacagtttaACCTGATGAGTTATCCTCATCAATCCCAGTCAGGAAGTAACAGGCAGCTGGAATAGAGGGTGGGGCTAGCAGATTGCACAATCAATGGCCATTGGGATTGAGTGTGTGAGTGGTTTGGAGGGGTGAGCTGGGAGGTGTTAAGAGACTATCCGTAAGTAGACAATAGAactgaagaagaggaggagctTCTGATGTCACAGAAACAGGGGCAGCTAATAGAAGTGTTGGAATGCTGGGTTAACCTTAGGGGCCAATGAGTGAGGAGCCAGCAGAAGGCAGAGGCGGGGCTTGTGAGGTCAGAGTTCAGATCATGTGATTGTGTTCTGTAGAGGGCATAGGGAAATTAgaatcattaatattattgacaGATTTTAATGTTatctaatttgtattattactgaattacagtaactggtgattttttgttttgttttcaataagcaaattaaaaatgtcatccTTAATCAGTAACAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73715 lncRNA upstream 155 45582519 ~ 45584669 (+) False AMCG00009758
TU73708 lncRNA upstream 8860 45573270 ~ 45575964 (+) True AMCG00009760
TU73604 lncRNA upstream 71777 45512636 ~ 45513047 (+) True G58876
TU73534 lncRNA upstream 186371 45339605 ~ 45398453 (+) True G58821
TU73535 lncRNA upstream 251968 45329784 ~ 45332856 (+) True G58822
TU73754 lncRNA downstream 54305 45639635 ~ 45640037 (+) True G59006
TU73778 lncRNA downstream 88599 45673929 ~ 45674702 (+) True G59026
TU73780 lncRNA downstream 90373 45675703 ~ 45683641 (+) True G59028
TU73805 lncRNA downstream 116637 45701967 ~ 45702889 (+) True G59047
TU73840 lncRNA downstream 160611 45745941 ~ 45746254 (+) True G59076
AMCG00009758 mRNA upstream 97 45576539 ~ 45584727 (+) True AMCG00009758
AMCG00009760 mRNA upstream 10748 45573270 ~ 45574076 (+) False AMCG00009760
AMCG00009759 mRNA upstream 12569 45560291 ~ 45572255 (+) False AMCG00009759
AMCG00009757 mRNA upstream 53388 45521353 ~ 45531436 (+) True AMCG00009757
AMCG00009761 mRNA upstream 73787 45507767 ~ 45511037 (+) True AMCG00009761
AMCG00009763 mRNA downstream 13277 45598607 ~ 45629378 (+) True AMCG00009763
AMCG00009764 mRNA downstream 57908 45643238 ~ 45647541 (+) True AMCG00009764
AMCG00009765 mRNA downstream 64754 45650084 ~ 45656237 (+) True AMCG00009765
AMCG00009762 mRNA downstream 71431 45656761 ~ 45660486 (+) True AMCG00009762
AMCG00009772 mRNA downstream 290303 45875633 ~ 45879015 (+) True AMCG00009772
TU73611 other upstream 13189 45559977 ~ 45571635 (+) True AMCG00009759
TU73602 other upstream 75720 45508194 ~ 45509104 (+) False AMCG00009761
TU73437 other upstream 526950 45056065 ~ 45057874 (+) True G58747
TU73251 other upstream 932857 44632750 ~ 44651967 (+) True G58600
TU73244 other upstream 985496 44584562 ~ 44599328 (+) False AMCG00009700
TU73851 other downstream 169256 45754586 ~ 45755115 (+) True G59084

Expression Profile