RNA id: TU73754



Basic Information


Item Value
RNA id TU73754
length 403
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G59006
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45639635 ~ 45640037 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gtatttgtgtgtgtgcgtgtagtttctgtaacatgtcttTAACagtgtgttaatttacatccatacaatcacAGATGCACCATAGAAATTGGGTTTCGTGTCTGTAGATGGCAGTGTTAATGCAACACTGCCTCCTATGGACACGTCAACCTTACGTGCAAGTGTGCTAGCAGACAGCTGTGCGACCGTCTGCGTACGATGCCCACACATGTATAAGTATTAACCAGCCTTTACCTGAGGACCCAGAGGGGGGGGGTGCGCCGGACTGCTGCCACACTGTGGCCTCGGCGGCCATGCGGCGGATGTAGACGTCATCCACACACATCAGGATGTTCTCCGGCTTGATATCCGTGTGGATGATCTTACACTTGGTGTGCAAGTAGTCCAGACCCTGCAGGACCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73710 lncRNA upstream 54305 45584758 ~ 45585330 (+) True G58971
TU73711 lncRNA upstream 54305 45584824 ~ 45585330 (+) False G58971
TU73715 lncRNA upstream 54966 45582519 ~ 45584669 (+) False AMCG00009758
TU73708 lncRNA upstream 63671 45573270 ~ 45575964 (+) True AMCG00009760
TU73604 lncRNA upstream 126588 45512636 ~ 45513047 (+) True G58876
TU73778 lncRNA downstream 33892 45673929 ~ 45674702 (+) True G59026
TU73780 lncRNA downstream 35666 45675703 ~ 45683641 (+) True G59028
TU73805 lncRNA downstream 61930 45701967 ~ 45702889 (+) True G59047
TU73840 lncRNA downstream 105904 45745941 ~ 45746254 (+) True G59076
TU73845 lncRNA downstream 107483 45747520 ~ 45748462 (+) True G59078
AMCG00009763 mRNA upstream 10257 45598607 ~ 45629378 (+) True AMCG00009763
AMCG00009758 mRNA upstream 54908 45576539 ~ 45584727 (+) True AMCG00009758
AMCG00009760 mRNA upstream 65559 45573270 ~ 45574076 (+) False AMCG00009760
AMCG00009759 mRNA upstream 67380 45560291 ~ 45572255 (+) False AMCG00009759
AMCG00009757 mRNA upstream 108199 45521353 ~ 45531436 (+) True AMCG00009757
AMCG00009764 mRNA downstream 3201 45643238 ~ 45647541 (+) True AMCG00009764
AMCG00009765 mRNA downstream 10047 45650084 ~ 45656237 (+) True AMCG00009765
AMCG00009762 mRNA downstream 16724 45656761 ~ 45660486 (+) True AMCG00009762
AMCG00009772 mRNA downstream 235596 45875633 ~ 45879015 (+) True AMCG00009772
AMCG00009778 mRNA downstream 264850 45904887 ~ 45913188 (+) True AMCG00009778
TU73611 other upstream 68000 45559977 ~ 45571635 (+) True AMCG00009759
TU73602 other upstream 130531 45508194 ~ 45509104 (+) False AMCG00009761
TU73437 other upstream 581761 45056065 ~ 45057874 (+) True G58747
TU73251 other upstream 987668 44632750 ~ 44651967 (+) True G58600
TU73244 other upstream 1040307 44584562 ~ 44599328 (+) False AMCG00009700
TU73851 other downstream 114549 45754586 ~ 45755115 (+) True G59084

Expression Profile