RNA id: TU73849



Basic Information


Item Value
RNA id TU73849
length 428
lncRNA type inter_gene
GC content 0.59
exon number 1
gene id G59082
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45752070 ~ 45752497 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


cactgacagctcACCAGCCAGCCTCTTCTTGCTGGGGGGCGTCGCTCGGTGCCGTCGGGGGGGAGTCTCGTCTATCTGCAGCTCATCCTCAGTGTCACTGCCCCCACCCACCGCGCCCTCCAGCTGACCAGTCAGGGGCTGGAACCTGGCTGTGGCACCTCCTGACCGTGACCCCTTTTTACTGAGAGacaaaaaacagagagagagggagagagagagagagagagagagagagagagagagaggagaattCCATCAATCTCAGAGAACAGGGGCCGGTAATACAGTGTCTATGTGCTACAGTGCATCTCTCCCTGcatcctccccctccccctcaccccAGGATCTTGCCGTTGGTCAGAACGAGGCGTAGTTTGCTCTTGTTCAGTTTGCCCTCCAGGTCGTCCAGACAGGAGGCAGGCAGCTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73848 lncRNA upstream 63 45751572 ~ 45752007 (+) True G59081
TU73845 lncRNA upstream 3608 45747520 ~ 45748462 (+) True G59078
TU73843 lncRNA upstream 3608 45747567 ~ 45748462 (+) False G59078
TU73840 lncRNA upstream 5816 45745941 ~ 45746254 (+) True G59076
TU73805 lncRNA upstream 49181 45701967 ~ 45702889 (+) True G59047
TU73850 lncRNA downstream 225 45752722 ~ 45753672 (+) True G59083
TU73852 lncRNA downstream 3092 45755589 ~ 45755956 (+) True G59085
TU73853 lncRNA downstream 3755 45756252 ~ 45756770 (+) True G59086
TU73854 lncRNA downstream 4613 45757110 ~ 45758269 (+) True G59087
TU73858 lncRNA downstream 7178 45759675 ~ 45763138 (+) True G59091
AMCG00009762 mRNA upstream 91584 45656761 ~ 45660486 (+) True AMCG00009762
AMCG00009765 mRNA upstream 95833 45650084 ~ 45656237 (+) True AMCG00009765
AMCG00009764 mRNA upstream 104529 45643238 ~ 45647541 (+) True AMCG00009764
AMCG00009763 mRNA upstream 122692 45598607 ~ 45629378 (+) True AMCG00009763
AMCG00009758 mRNA upstream 167343 45576539 ~ 45584727 (+) True AMCG00009758
AMCG00009772 mRNA downstream 123136 45875633 ~ 45879015 (+) True AMCG00009772
AMCG00009778 mRNA downstream 152390 45904887 ~ 45913188 (+) True AMCG00009778
AMCG00009780 mRNA downstream 166934 45919431 ~ 45921344 (+) True AMCG00009780
AMCG00009782 mRNA downstream 228592 45981089 ~ 45993288 (+) True AMCG00009782
AMCG00009781 mRNA downstream 247545 46000042 ~ 46021930 (+) True AMCG00009781
TU73611 other upstream 180435 45559977 ~ 45571635 (+) True AMCG00009759
TU73602 other upstream 242966 45508194 ~ 45509104 (+) False AMCG00009761
TU73437 other upstream 694196 45056065 ~ 45057874 (+) True G58747
TU73251 other upstream 1100103 44632750 ~ 44651967 (+) True G58600
TU73244 other upstream 1152742 44584562 ~ 44599328 (+) False AMCG00009700
TU73851 other downstream 2089 45754586 ~ 45755115 (+) True G59084

Expression Profile