RNA id: TU73852


Basic Information

Item Value
RNA id TU73852
length 368
lncRNA type inter_gene
GC content 0.64
exon number 1
gene id G59085
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45755589 ~ 45755956 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTAGTGCTGCACGTCGCTGACGGAGAAGCTGGGGGGGGGCAGGCTCATGCCCAGGCCGTCGCGCCGCAGCACCAGCACCGGCACACTGAATGAGCGCTCCTCCAGAAACTCCACTGTCAGCTGGGCCCCCGACGGGCGCAGGAGTACCTCGTccgcactgagagagagagttaattacacacccacacagaaagagacagagagagagacagacaaagaacCAGCTGCTCAGGGGTGACAGACCTGGGGAAGGTGCGTCCCCGTAGCTCCCTGATAAACTGGGGGCTGCCGGTCTTCACAGGACGTCCCGCCTCCCGCGCCGCCCCGCTGTGAGCCTCCTGCTTGTGAGAGCCCCTCCGCCTGCGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73850 lncRNA upstream 1917 45752722 ~ 45753672 (+) True G59083
TU73849 lncRNA upstream 3092 45752070 ~ 45752497 (+) True G59082
TU73848 lncRNA upstream 3582 45751572 ~ 45752007 (+) True G59081
TU73845 lncRNA upstream 7127 45747520 ~ 45748462 (+) True G59078
TU73843 lncRNA upstream 7127 45747567 ~ 45748462 (+) False G59078
TU73853 lncRNA downstream 296 45756252 ~ 45756770 (+) True G59086
TU73854 lncRNA downstream 1154 45757110 ~ 45758269 (+) True G59087
TU73858 lncRNA downstream 3719 45759675 ~ 45763138 (+) True G59091
TU73912 lncRNA downstream 118167 45874123 ~ 45874432 (+) True G59128
TU73930 lncRNA downstream 188676 45944632 ~ 45997710 (+) False AMCG00009782
AMCG00009762 mRNA upstream 95103 45656761 ~ 45660486 (+) True AMCG00009762
AMCG00009765 mRNA upstream 99352 45650084 ~ 45656237 (+) True AMCG00009765
AMCG00009764 mRNA upstream 108048 45643238 ~ 45647541 (+) True AMCG00009764
AMCG00009763 mRNA upstream 126211 45598607 ~ 45629378 (+) True AMCG00009763
AMCG00009758 mRNA upstream 170862 45576539 ~ 45584727 (+) True AMCG00009758
AMCG00009772 mRNA downstream 119677 45875633 ~ 45879015 (+) True AMCG00009772
AMCG00009778 mRNA downstream 148931 45904887 ~ 45913188 (+) True AMCG00009778
AMCG00009780 mRNA downstream 163475 45919431 ~ 45921344 (+) True AMCG00009780
AMCG00009782 mRNA downstream 225133 45981089 ~ 45993288 (+) True AMCG00009782
AMCG00009781 mRNA downstream 244086 46000042 ~ 46021930 (+) True AMCG00009781
TU73851 other upstream 474 45754586 ~ 45755115 (+) True G59084
TU73611 other upstream 183954 45559977 ~ 45571635 (+) True AMCG00009759
TU73602 other upstream 246485 45508194 ~ 45509104 (+) False AMCG00009761
TU73437 other upstream 697715 45056065 ~ 45057874 (+) True G58747
TU73251 other upstream 1103622 44632750 ~ 44651967 (+) True G58600

Expression Profile