RNA id: TU73912


Basic Information

Item Value
RNA id TU73912
length 310
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G59128
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45874123 ~ 45874432 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

caaattttggTTGGAAAATATGTGATTTAGGGGATTTTTAGCACATTtcgttaatataatttacatttcgTGAACACATTTCGTGAACATAATTCTCATTTTATCCCACGAAATGCCCACGTAtttggcaattttggacgaaaggtaaaatttgctttgctttccatggacggaatgaacaattagcatccTGATCaacagtgactgatcaaggcatcgATCCAGAGACCCAGGTTTACAACGAGATCAGGATTGAACtgcaaaggaaagttagaaactcgCTGAGCCAATCAGACGAGcgctatatcag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73858 lncRNA upstream 110985 45759675 ~ 45763138 (+) True G59091
TU73854 lncRNA upstream 115854 45757110 ~ 45758269 (+) True G59087
TU73853 lncRNA upstream 117353 45756252 ~ 45756770 (+) True G59086
TU73852 lncRNA upstream 118167 45755589 ~ 45755956 (+) True G59085
TU73850 lncRNA upstream 120451 45752722 ~ 45753672 (+) True G59083
TU73930 lncRNA downstream 70200 45944632 ~ 45997710 (+) False AMCG00009782
TU73927 lncRNA downstream 118742 45993174 ~ 45997710 (+) False AMCG00009782
TU73931 lncRNA downstream 118742 45993174 ~ 45997710 (+) False AMCG00009782
TU73940 lncRNA downstream 143902 46018334 ~ 46022184 (+) False AMCG00009781
TU73945 lncRNA downstream 154263 46028695 ~ 46028969 (+) True G59142
AMCG00009762 mRNA upstream 213637 45656761 ~ 45660486 (+) True AMCG00009762
AMCG00009765 mRNA upstream 217886 45650084 ~ 45656237 (+) True AMCG00009765
AMCG00009764 mRNA upstream 226582 45643238 ~ 45647541 (+) True AMCG00009764
AMCG00009763 mRNA upstream 244745 45598607 ~ 45629378 (+) True AMCG00009763
AMCG00009758 mRNA upstream 289396 45576539 ~ 45584727 (+) True AMCG00009758
AMCG00009772 mRNA downstream 1201 45875633 ~ 45879015 (+) True AMCG00009772
AMCG00009778 mRNA downstream 30455 45904887 ~ 45913188 (+) True AMCG00009778
AMCG00009780 mRNA downstream 44999 45919431 ~ 45921344 (+) True AMCG00009780
AMCG00009782 mRNA downstream 106657 45981089 ~ 45993288 (+) True AMCG00009782
AMCG00009781 mRNA downstream 125610 46000042 ~ 46021930 (+) True AMCG00009781
TU73851 other upstream 119008 45754586 ~ 45755115 (+) True G59084
TU73611 other upstream 302488 45559977 ~ 45571635 (+) True AMCG00009759
TU73602 other upstream 365019 45508194 ~ 45509104 (+) False AMCG00009761
TU73437 other upstream 816249 45056065 ~ 45057874 (+) True G58747
TU73251 other upstream 1222156 44632750 ~ 44651967 (+) True G58600

Expression Profile