RNA id: TU73945


Basic Information

Item Value
RNA id TU73945
length 275
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G59142
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 46028695 ~ 46028969 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cggcgcttactcaagacgcatctcttccgacagcacttaatattaattaagtaatattagtaatattagtcctctatccctgctagatagcacttcacagttttattttgcttctcgtgttcttgattgttttcctccttgctccctttcccgtagccctcgtctgtaaccctacatttgacagcacttagctttcaccatccaggatgtaggaagtctcttactgtacttgtgtaaattgtaaattggaatttgtaaaatgtattttgaattgc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73940 lncRNA upstream 6511 46018334 ~ 46022184 (+) False AMCG00009781
TU73930 lncRNA upstream 30985 45944632 ~ 45997710 (+) False AMCG00009782
TU73927 lncRNA upstream 30985 45993174 ~ 45997710 (+) False AMCG00009782
TU73931 lncRNA upstream 30985 45993174 ~ 45997710 (+) False AMCG00009782
TU73912 lncRNA upstream 154263 45874123 ~ 45874432 (+) True G59128
TU73955 lncRNA downstream 36459 46065428 ~ 46133506 (+) True G59152
TU73959 lncRNA downstream 75167 46104136 ~ 46128356 (+) False AMCG00009786
TU73960 lncRNA downstream 83251 46112220 ~ 46112856 (+) True G59156
TU73975 lncRNA downstream 140792 46169761 ~ 46187549 (+) True G59169
TU73988 lncRNA downstream 161677 46190646 ~ 46195343 (+) True G59180
AMCG00009781 mRNA upstream 6765 46000042 ~ 46021930 (+) True AMCG00009781
AMCG00009782 mRNA upstream 35407 45981089 ~ 45993288 (+) True AMCG00009782
AMCG00009780 mRNA upstream 107351 45919431 ~ 45921344 (+) True AMCG00009780
AMCG00009778 mRNA upstream 115507 45904887 ~ 45913188 (+) True AMCG00009778
AMCG00009772 mRNA upstream 149680 45875633 ~ 45879015 (+) True AMCG00009772
AMCG00009784 mRNA downstream 76431 46105400 ~ 46109996 (+) True AMCG00009784
AMCG00009786 mRNA downstream 89553 46118522 ~ 46128347 (+) True AMCG00009786
AMCG00009785 mRNA downstream 176139 46205108 ~ 46217730 (+) True AMCG00009785
TU73851 other upstream 273580 45754586 ~ 45755115 (+) True G59084
TU73611 other upstream 457060 45559977 ~ 45571635 (+) True AMCG00009759
TU73602 other upstream 519591 45508194 ~ 45509104 (+) False AMCG00009761
TU73437 other upstream 970821 45056065 ~ 45057874 (+) True G58747
TU73251 other upstream 1376728 44632750 ~ 44651967 (+) True G58600

Expression Profile