RNA id: AMCG00009810


Basic Information

Item Value
RNA id AMCG00009810
length 219
RNA type mRNA
GC content 0.46
exon number 2
gene id AMCG00009810
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 108684 ~ 122048 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGGATTTTGTTGTTGAAGCAACTAGCGGTGCGAGTAGTGATCTTAGTGGttcaaagcaatttaaaaggaaattattatttccttACCTAGAGAGAATGACAGCTGAGCTTGACCAGAGTTTTTCAAGTCTGGGAGAAACACTCCTCCAGACGCCGGTGGAATGGACGCAGGTCCTCTGGCACCCTCTGGCCATGGACCTCAATACCATCTGCTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU94349 lncRNA upstream 1639 106073 ~ 107045 (+) True G75556
TU94314 lncRNA upstream 10655 91458 ~ 98029 (+) True G75528
TU94316 lncRNA upstream 16901 47559 ~ 91783 (+) False G75528
TU94324 lncRNA upstream 67284 31464 ~ 41400 (+) True G75533
TU94366 lncRNA downstream 182745 304793 ~ 319899 (+) True G75572
TU94403 lncRNA downstream 464816 586864 ~ 608775 (+) True G75600
TU94449 lncRNA downstream 618431 740479 ~ 741030 (+) True G75642
TU94451 lncRNA downstream 620837 742885 ~ 746072 (+) True G75644
TU94559 lncRNA downstream 862548 984596 ~ 995847 (+) False AMCG00009838
AMCG00009813 mRNA upstream 1094 107233 ~ 107590 (+) True AMCG00009813
AMCG00009815 mRNA downstream 109986 232034 ~ 233872 (+) True AMCG00009815
AMCG00009818 mRNA downstream 510346 632394 ~ 654167 (+) True AMCG00009818
AMCG00009820 mRNA downstream 566851 688899 ~ 702109 (+) True AMCG00009820
AMCG00009819 mRNA downstream 625981 748029 ~ 749679 (+) True AMCG00009819
AMCG00009823 mRNA downstream 663477 785525 ~ 788379 (+) True AMCG00009823
TU94510 other downstream 745632 867680 ~ 871735 (+) False AMCG00009821
TU94585 other downstream 915158 1037206 ~ 1037442 (+) True G75745
TU94657 other downstream 1200570 1322618 ~ 1327564 (+) False AMCG00009844
TU94663 other downstream 1211919 1333967 ~ 1335050 (+) True G75807
TU94664 other downstream 1238488 1360536 ~ 1363834 (+) True AMCG00009851