RNA id: AMCG00009904



Basic Information


Item Value
RNA id AMCG00009904
length 219
RNA type mRNA
GC content 0.45
exon number 3
gene id AMCG00009904
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 5142003 ~ 5144936 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTTAGCACTCTATGTGTATGAATATTTACTCCATGTAGGAGCCCAGAAATCAGCACAGACCTTTCTGTCAGAGaTACGATGGGAGAAAAACATCACATTAGGGGAACCCCCTGGATTTCTTCATTCATGGTGGTGCGTATTTTGGGATCTCTATTGTGCGGCACCTGAAAGAAGAGAGACATGTGAACACTCCAGCGAAGCAAAAGCCTTTCACGActa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU95199 lncRNA upstream 221157 4911270 ~ 4920846 (+) False AMCG00009898
TU95119 lncRNA upstream 888449 4253237 ~ 4253554 (+) True G76186
TU95095 lncRNA upstream 1247184 3891161 ~ 3894819 (+) False G76168
TU95097 lncRNA upstream 1247184 3892584 ~ 3894819 (+) True G76168
TU95090 lncRNA upstream 1344995 3796551 ~ 3797008 (+) True G76163
TU95233 lncRNA downstream 13452 5158388 ~ 5228786 (+) True G76266
TU95253 lncRNA downstream 98791 5243727 ~ 5248181 (+) False AMCG00009897
TU95334 lncRNA downstream 317587 5462523 ~ 5462811 (+) True G76346
TU95410 lncRNA downstream 599321 5744257 ~ 5751212 (+) True G76408
TU95417 lncRNA downstream 622941 5767877 ~ 5769052 (+) False AMCG00009915
AMCG00009896 mRNA upstream 128673 5011378 ~ 5013330 (+) True AMCG00009896
AMCG00009898 mRNA upstream 221119 4910970 ~ 4920884 (+) True AMCG00009898
AMCG00009888 mRNA upstream 425059 4699682 ~ 4716944 (+) True AMCG00009888
AMCG00009891 mRNA upstream 663280 4477621 ~ 4478723 (+) True AMCG00009891
AMCG00009889 mRNA upstream 665545 4475292 ~ 4476458 (+) True AMCG00009889
AMCG00009897 mRNA downstream 87696 5232632 ~ 5248181 (+) True AMCG00009897
AMCG00009906 mRNA downstream 293531 5438467 ~ 5448319 (+) True AMCG00009906
AMCG00009905 mRNA downstream 313350 5458286 ~ 5459884 (+) True AMCG00009905
AMCG00009909 mRNA downstream 364148 5509084 ~ 5525562 (+) True AMCG00009909
AMCG00009911 mRNA downstream 418039 5562975 ~ 5594007 (+) True AMCG00009911
TU94664 other upstream 3778169 1360536 ~ 1363834 (+) True AMCG00009851
TU94663 other upstream 3806953 1333967 ~ 1335050 (+) True G75807
TU94657 other upstream 3814439 1322618 ~ 1327564 (+) False AMCG00009844
TU94585 other upstream 4104561 1037206 ~ 1037442 (+) True G75745
TU94510 other upstream 4270268 867680 ~ 871735 (+) False AMCG00009821
TU96625 other downstream 6004690 11149626 ~ 11155469 (+) True G77423
TU96770 other downstream 6555770 11700706 ~ 11701081 (+) True G77541
TU97434 other downstream 10496025 15640961 ~ 15642841 (+) False AMCG00010119
TU97557 other downstream 10912595 16057531 ~ 16060087 (+) True G78198
TU97783 other downstream 12078946 17223882 ~ 17225340 (+) False AMCG00010164

Expression Profile