Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00009906 |
| length | 859 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 6 |
| gene id | AMCG00009906 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 5438467 ~ 5448319 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0046655 | folic acid metabolic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0009165 | nucleotide biosynthetic process | biological_process |
| GO:0006545 | glycine biosynthetic process | biological_process |
| GO:0001947 | heart looping | biological_process |
| GO:0060047 | heart contraction | biological_process |
| GO:0050661 | NADP binding | molecular_function |
| GO:0004146 | dihydrofolate reductase activity | molecular_function |
| id | description |
|---|---|
| K00287 | DHFR, folA; dihydrofolate reductase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU95253 | lncRNA | upstream | 190286 | 5243727 ~ 5248181 (+) | False | AMCG00009897 |
| TU95233 | lncRNA | upstream | 209681 | 5158388 ~ 5228786 (+) | True | G76266 |
| TU95199 | lncRNA | upstream | 517621 | 4911270 ~ 4920846 (+) | False | AMCG00009898 |
| TU95119 | lncRNA | upstream | 1184913 | 4253237 ~ 4253554 (+) | True | G76186 |
| TU95095 | lncRNA | upstream | 1543648 | 3891161 ~ 3894819 (+) | False | G76168 |
| TU95334 | lncRNA | downstream | 14204 | 5462523 ~ 5462811 (+) | True | G76346 |
| TU95410 | lncRNA | downstream | 295938 | 5744257 ~ 5751212 (+) | True | G76408 |
| TU95417 | lncRNA | downstream | 319558 | 5767877 ~ 5769052 (+) | False | AMCG00009915 |
| TU95419 | lncRNA | downstream | 321936 | 5770255 ~ 5771092 (+) | True | G76417 |
| TU95420 | lncRNA | downstream | 323355 | 5771674 ~ 5771949 (+) | True | G76418 |
| AMCG00009897 | mRNA | upstream | 190286 | 5232632 ~ 5248181 (+) | True | AMCG00009897 |
| AMCG00009904 | mRNA | upstream | 293531 | 5142003 ~ 5144936 (+) | True | AMCG00009904 |
| AMCG00009896 | mRNA | upstream | 425137 | 5011378 ~ 5013330 (+) | True | AMCG00009896 |
| AMCG00009898 | mRNA | upstream | 517583 | 4910970 ~ 4920884 (+) | True | AMCG00009898 |
| AMCG00009888 | mRNA | upstream | 721523 | 4699682 ~ 4716944 (+) | True | AMCG00009888 |
| AMCG00009905 | mRNA | downstream | 9967 | 5458286 ~ 5459884 (+) | True | AMCG00009905 |
| AMCG00009909 | mRNA | downstream | 60765 | 5509084 ~ 5525562 (+) | True | AMCG00009909 |
| AMCG00009911 | mRNA | downstream | 114656 | 5562975 ~ 5594007 (+) | True | AMCG00009911 |
| AMCG00009914 | mRNA | downstream | 147119 | 5595438 ~ 5602983 (+) | True | AMCG00009914 |
| AMCG00009916 | mRNA | downstream | 269379 | 5717698 ~ 5744142 (+) | True | AMCG00009916 |
| TU94664 | other | upstream | 4074633 | 1360536 ~ 1363834 (+) | True | AMCG00009851 |
| TU94663 | other | upstream | 4103417 | 1333967 ~ 1335050 (+) | True | G75807 |
| TU94657 | other | upstream | 4110903 | 1322618 ~ 1327564 (+) | False | AMCG00009844 |
| TU94585 | other | upstream | 4401025 | 1037206 ~ 1037442 (+) | True | G75745 |
| TU94510 | other | upstream | 4566732 | 867680 ~ 871735 (+) | False | AMCG00009821 |
| TU96625 | other | downstream | 5701307 | 11149626 ~ 11155469 (+) | True | G77423 |
| TU96770 | other | downstream | 6252387 | 11700706 ~ 11701081 (+) | True | G77541 |
| TU97434 | other | downstream | 10192642 | 15640961 ~ 15642841 (+) | False | AMCG00010119 |
| TU97557 | other | downstream | 10609212 | 16057531 ~ 16060087 (+) | True | G78198 |
| TU97783 | other | downstream | 11775563 | 17223882 ~ 17225340 (+) | False | AMCG00010164 |
