RNA id: AMCG00009914



Basic Information


Item Value
RNA id AMCG00009914
length 450
RNA type mRNA
GC content 0.52
exon number 6
gene id AMCG00009914
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 5595438 ~ 5602983 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTGGGGTGGGGATAAAGACAAACAGCTGTATTTTGTGGAAGCTTGGTACAAAAGCTCCACCTTCACTCAAAATGCGCTTACCAGagttttcaaaaaaaaaaaaatccatggaGGCTTCGCTTGGGTGCGCAGTGAGGCtgggagggggtggagggggtggagTGGGGCCACGAACGCTCAGTGTCGTGCTGTGAGGCTGGCCATGTGTCCCAGTGTCTTGACCTCTGTGTTTCATGTTTTGGTCCTGCAGTTGCACGCAGCCCAGCTGAAGTCAGAAGCCTGCAGGAAAGTGCAATGGAATCCACACGCACTCAGTAAATTCTCTGTGCTGCTGGGGGATGTATTGCGAGTATTGCGAGAATCAACTGACAGTGTTGTGTTGGCTGCTTGTTGCTTCCTGAACTatgagtctctgtgtgtctgttgggGGCGATGCGGTGGGGGCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU95334 lncRNA upstream 132627 5462523 ~ 5462811 (+) True G76346
TU95253 lncRNA upstream 347257 5243727 ~ 5248181 (+) False AMCG00009897
TU95233 lncRNA upstream 366652 5158388 ~ 5228786 (+) True G76266
TU95199 lncRNA upstream 674592 4911270 ~ 4920846 (+) False AMCG00009898
TU95119 lncRNA upstream 1341884 4253237 ~ 4253554 (+) True G76186
TU95410 lncRNA downstream 141274 5744257 ~ 5751212 (+) True G76408
TU95417 lncRNA downstream 164894 5767877 ~ 5769052 (+) False AMCG00009915
TU95419 lncRNA downstream 167272 5770255 ~ 5771092 (+) True G76417
TU95420 lncRNA downstream 168691 5771674 ~ 5771949 (+) True G76418
TU95439 lncRNA downstream 172973 5775956 ~ 5776174 (+) True G76434
AMCG00009911 mRNA upstream 1431 5562975 ~ 5594007 (+) True AMCG00009911
AMCG00009909 mRNA upstream 69876 5509084 ~ 5525562 (+) True AMCG00009909
AMCG00009905 mRNA upstream 135554 5458286 ~ 5459884 (+) True AMCG00009905
AMCG00009906 mRNA upstream 147119 5438467 ~ 5448319 (+) True AMCG00009906
AMCG00009897 mRNA upstream 347257 5232632 ~ 5248181 (+) True AMCG00009897
AMCG00009916 mRNA downstream 114715 5717698 ~ 5744142 (+) True AMCG00009916
AMCG00009915 mRNA downstream 163354 5766337 ~ 5768059 (+) True AMCG00009915
AMCG00009919 mRNA downstream 183442 5786425 ~ 5794926 (+) True AMCG00009919
AMCG00009923 mRNA downstream 287297 5890280 ~ 5894977 (+) True AMCG00009923
AMCG00009922 mRNA downstream 330038 5933021 ~ 5940090 (+) True AMCG00009922
TU94664 other upstream 4231604 1360536 ~ 1363834 (+) True AMCG00009851
TU94663 other upstream 4260388 1333967 ~ 1335050 (+) True G75807
TU94657 other upstream 4267874 1322618 ~ 1327564 (+) False AMCG00009844
TU94585 other upstream 4557996 1037206 ~ 1037442 (+) True G75745
TU94510 other upstream 4723703 867680 ~ 871735 (+) False AMCG00009821
TU96625 other downstream 5546643 11149626 ~ 11155469 (+) True G77423
TU96770 other downstream 6097723 11700706 ~ 11701081 (+) True G77541
TU97434 other downstream 10037978 15640961 ~ 15642841 (+) False AMCG00010119
TU97557 other downstream 10454548 16057531 ~ 16060087 (+) True G78198
TU97783 other downstream 11620899 17223882 ~ 17225340 (+) False AMCG00010164

Expression Profile