RNA id: AMCG00009983



Basic Information


Item Value
RNA id AMCG00009983
length 522
RNA type mRNA
GC content 0.61
exon number 2
gene id AMCG00009983
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 8118435 ~ 8119318 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCCCATCACCCAAGAGAATGCGTTCAGTCacctccccctgctggagcgcTGGCTTCGGGTCCAGTCCGAGCAGGACCCTGGAAAGGGCAGTCAGCACCTCTGCCAAGCAGCCATCCAGAAACTGGTGGAATACATTGAGCTGAACTTTACCGAGGGGCAGAGCGTGCTGCAGCCCACCCCTCAGAGGGAGGGCATGGATCTGGAGGTGCGGGGCGTCTGCCTGTGCAAGGAGGAGGGAGATGGCGATGAGTTCGGCCTCAGCTTTGGCAACATCCCCATCTTTGGGGATCCGGATGGGAGGAAGACAGGCGGGCGGAGGAGACGGAGGAAGGGAGACACGGGCCCCGTGCTGGAGGTGGGGTGTATATGGGTGACAGAGGTGAAGAAGCTGAGCCCAGCCGCCCGTTGTGGGGAGATCAAACTCCGCGATGAGCTCCTGTCTCTCAATGGCCAGCTGATGGTGGGGGTCGATGTCACCGGAGCCAGGAAAGAGAGCTGTCTCATGTTCACCACAGCGTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU96033 lncRNA upstream 224045 7889483 ~ 7894390 (+) True G76935
TU95949 lncRNA upstream 465604 7651722 ~ 7652831 (+) True G76864
TU95947 lncRNA upstream 468244 7649490 ~ 7650191 (+) True G76863
TU95942 lncRNA upstream 470269 7615958 ~ 7648166 (+) False G76859
TU96132 lncRNA downstream 194798 8314116 ~ 8317675 (+) True G77012
TU96148 lncRNA downstream 319189 8438507 ~ 8438786 (+) True G77028
TU96169 lncRNA downstream 578360 8697678 ~ 8700117 (+) True G77049
TU96195 lncRNA downstream 689033 8808351 ~ 8808607 (+) True G77073
TU96266 lncRNA downstream 1085024 9204342 ~ 9205423 (+) True G77126
AMCG00009982 mRNA upstream 35827 8075205 ~ 8082608 (+) True AMCG00009982
AMCG00009985 mRNA upstream 64642 8034623 ~ 8053793 (+) True AMCG00009985
AMCG00009984 mRNA upstream 88754 8003837 ~ 8029681 (+) True AMCG00009984
AMCG00009979 mRNA upstream 230363 7882634 ~ 7888072 (+) True AMCG00009979
AMCG00009980 mRNA upstream 248545 7861151 ~ 7869890 (+) True AMCG00009980
AMCG00009986 mRNA downstream 37500 8156818 ~ 8204133 (+) True AMCG00009986
AMCG00009988 mRNA downstream 150799 8270117 ~ 8310270 (+) True AMCG00009988
AMCG00009991 mRNA downstream 275634 8394952 ~ 8395968 (+) True AMCG00009991
AMCG00009990 mRNA downstream 285525 8404843 ~ 8430633 (+) True AMCG00009990
AMCG00009993 mRNA downstream 549557 8668875 ~ 8696061 (+) True AMCG00009993
TU94664 other upstream 6754601 1360536 ~ 1363834 (+) True AMCG00009851
TU94663 other upstream 6783385 1333967 ~ 1335050 (+) True G75807
TU94657 other upstream 6790871 1322618 ~ 1327564 (+) False AMCG00009844
TU94585 other upstream 7080993 1037206 ~ 1037442 (+) True G75745
TU94510 other upstream 7246700 867680 ~ 871735 (+) False AMCG00009821
TU96625 other downstream 3030308 11149626 ~ 11155469 (+) True G77423
TU96770 other downstream 3581388 11700706 ~ 11701081 (+) True G77541
TU97434 other downstream 7521643 15640961 ~ 15642841 (+) False AMCG00010119
TU97557 other downstream 7938213 16057531 ~ 16060087 (+) True G78198
TU97783 other downstream 9104564 17223882 ~ 17225340 (+) False AMCG00010164

Expression Profile