RNA id: AMCG00010014



Basic Information


Item Value
RNA id AMCG00010014
length 936
RNA type mRNA
GC content 0.52
exon number 6
gene id AMCG00010014
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 9914042 ~ 9919171 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCCTCCGAAGCTGCTCAAGAGTGCCCATTACATAGAGCTGGGAAGCTACCAGTATTGGCCAGTGCTTGTTCCACGAGGGATACGCCTGTACACATATGAGCAGATTCCTGTATTCCTGAAGGAAAACCCCTACATAACAGATGGTTACAGAGCCTACTTGCCATCAAGACTGTGCTTAAAAAGCCTTTTTATTCTGTCCAATGAAACTGTTAATATCTGGAGTCACTTGCTGGGCTTCTTCCTGTTCTTCACACTGGGGGTCTATGATATGACAATGGTACTGCCTGTCGCGGGGGCCTCCAGGGAAGACTATGTGATCTACTCCATAGGGCTCTTCTGCTTTCAGGTGTGCATGCTGTGCTCTGTGGGGTATCACCTGTTCTGCTGCCACCGCTCTGAGAAGACCAGTCGCCGCTGGATGGCATTAGACTATGCTGGGATCTCGATTGGAATCCTAGGCTGCTACGTTCCGGGGGTTTTCTATGCCTTTTACTGTAATAACTACTGGAGGCAGGTGTACCTGATCACGGTCCTGGCAATGATCCTGGCCGTGTTCTTCGCTCAGATCCACCCACATTACCTCACCCAGCAGTGGCACAGACTGCGCTCCGTCATCTTCTGCTCGGTCGCCGGCTACGGAGTCATTCCCACCATCCACTGGGTTTGGCTCAATGGAGGCTTCGGTGCCATTATCGTCCAGGTGTTTGTCCCGCGTGTCCTGGTGATGTATCTGATCGCTGCTGTGGCCTTCCTCTTTTACATTTCCAAAGTCCCAGAACGCTATTTCCCAGGGCAACTAAACTACCTGGGCTCAAGCCATCAGGTGTGGCACGTCCTCGTGGTGCTCATGTTTTATTGGTGGCACCAGTCTGCAGTGTACATCATGCAATACCGACACAGCCAGCCGTGTCCCGAGTACCCAGTCCACACATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU96390 lncRNA upstream 170942 9741789 ~ 9743100 (+) True G77233
TU96357 lncRNA upstream 352236 9561309 ~ 9561806 (+) True G77207
TU96350 lncRNA upstream 396030 9517658 ~ 9518012 (+) True G77201
TU96347 lncRNA upstream 482413 9429243 ~ 9431629 (+) True G77198
TU96341 lncRNA upstream 494672 9416430 ~ 9419370 (+) True G77192
TU96416 lncRNA downstream 3550 9922721 ~ 9926110 (+) True G77255
TU96453 lncRNA downstream 77183 9996354 ~ 9997885 (+) True G77285
TU96516 lncRNA downstream 384024 10303195 ~ 10305242 (+) False AMCG00010021
TU96526 lncRNA downstream 396175 10315346 ~ 10316098 (+) True G77346
TU96533 lncRNA downstream 411549 10330720 ~ 10332498 (+) True G77349
AMCG00010013 mRNA upstream 200762 9690573 ~ 9713280 (+) True AMCG00010013
AMCG00010012 mRNA upstream 225943 9672221 ~ 9688099 (+) True AMCG00010012
AMCG00010006 mRNA upstream 499909 9392881 ~ 9414133 (+) True AMCG00010006
AMCG00010007 mRNA upstream 538298 9360116 ~ 9375744 (+) True AMCG00010007
AMCG00010005 mRNA upstream 563731 9347026 ~ 9350311 (+) True AMCG00010005
AMCG00010017 mRNA downstream 226382 10145553 ~ 10154362 (+) True AMCG00010017
AMCG00010020 mRNA downstream 372803 10291974 ~ 10299643 (+) True AMCG00010020
AMCG00010021 mRNA downstream 383755 10302926 ~ 10313486 (+) True AMCG00010021
AMCG00010025 mRNA downstream 414049 10333220 ~ 10359574 (+) True AMCG00010025
AMCG00010027 mRNA downstream 492535 10411706 ~ 10412110 (+) True AMCG00010027
TU94664 other upstream 8550208 1360536 ~ 1363834 (+) True AMCG00009851
TU94663 other upstream 8578992 1333967 ~ 1335050 (+) True G75807
TU94657 other upstream 8586478 1322618 ~ 1327564 (+) False AMCG00009844
TU94585 other upstream 8876600 1037206 ~ 1037442 (+) True G75745
TU94510 other upstream 9042307 867680 ~ 871735 (+) False AMCG00009821
TU96625 other downstream 1230455 11149626 ~ 11155469 (+) True G77423
TU96770 other downstream 1781535 11700706 ~ 11701081 (+) True G77541
TU97434 other downstream 5721790 15640961 ~ 15642841 (+) False AMCG00010119
TU97557 other downstream 6138360 16057531 ~ 16060087 (+) True G78198
TU97783 other downstream 7304711 17223882 ~ 17225340 (+) False AMCG00010164

Expression Profile