RNA id: AMCG00010026


Basic Information

Item Value
RNA id AMCG00010026
length 204
RNA type mRNA
GC content 0.50
exon number 2
gene id AMCG00010026
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 10753792 ~ 10754548 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCAGTGTGGCACACTAGATAACGACGCCTCGGTGACGTGGAAGGTCAATGGCACAGATGTGAAGGATCAAAAGGTAGAAGAAGGCCCACGACTCATTCTACAAGAGGTGAATCTAAGCAGCAACGGGCTCTACAGCTGCTTCGAGAACCCAAACGGAGACCGCAGAGATCAAATCACGCTTCGAGTGGGAAACAAATCATGA

Function

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0004896 cytokine receptor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU96533 lncRNA upstream 421294 10330720 ~ 10332498 (+) True G77349
TU96526 lncRNA upstream 437694 10315346 ~ 10316098 (+) True G77346
TU96516 lncRNA upstream 448550 10303195 ~ 10305242 (+) False AMCG00010021
TU96453 lncRNA upstream 755907 9996354 ~ 9997885 (+) True G77285
TU96416 lncRNA upstream 827682 9922721 ~ 9926110 (+) True G77255
TU96593 lncRNA downstream 223115 10977663 ~ 10978504 (+) True G77395
TU96648 lncRNA downstream 600543 11355091 ~ 11355362 (+) True G77445
TU96652 lncRNA downstream 629849 11384397 ~ 11387199 (+) True AMCG00010041
TU96744 lncRNA downstream 830406 11584954 ~ 11586100 (+) True G77517
TU96742 lncRNA downstream 836670 11591218 ~ 11639790 (+) True G77515
AMCG00010027 mRNA upstream 341682 10411706 ~ 10412110 (+) True AMCG00010027
AMCG00010025 mRNA upstream 394218 10333220 ~ 10359574 (+) True AMCG00010025
AMCG00010021 mRNA upstream 440306 10302926 ~ 10313486 (+) True AMCG00010021
AMCG00010020 mRNA upstream 454149 10291974 ~ 10299643 (+) True AMCG00010020
AMCG00010017 mRNA upstream 599430 10145553 ~ 10154362 (+) True AMCG00010017
AMCG00010024 mRNA downstream 39384 10793932 ~ 10798679 (+) True AMCG00010024
AMCG00010028 mRNA downstream 139661 10894209 ~ 10909942 (+) True AMCG00010028
AMCG00010034 mRNA downstream 330132 11084680 ~ 11085921 (+) True AMCG00010034
AMCG00010037 mRNA downstream 422544 11177092 ~ 11181005 (+) True AMCG00010037
AMCG00010036 mRNA downstream 461163 11215711 ~ 11244369 (+) True AMCG00010036
TU94664 other upstream 9389958 1360536 ~ 1363834 (+) True AMCG00009851
TU94663 other upstream 9418742 1333967 ~ 1335050 (+) True G75807
TU94657 other upstream 9426228 1322618 ~ 1327564 (+) False AMCG00009844
TU94585 other upstream 9716350 1037206 ~ 1037442 (+) True G75745
TU94510 other upstream 9882057 867680 ~ 871735 (+) False AMCG00009821
TU96625 other downstream 395078 11149626 ~ 11155469 (+) True G77423
TU96770 other downstream 946158 11700706 ~ 11701081 (+) True G77541
TU97434 other downstream 4886413 15640961 ~ 15642841 (+) False AMCG00010119
TU97557 other downstream 5302983 16057531 ~ 16060087 (+) True G78198
TU97783 other downstream 6469334 17223882 ~ 17225340 (+) False AMCG00010164

Expression Profile