Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00010204 |
| length | 1104 |
| RNA type | mRNA |
| GC content | 0.59 |
| exon number | 10 |
| gene id | AMCG00010204 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 18776456 ~ 18805818 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0097159 | organic cyclic compound binding | molecular_function |
| GO:1901363 | heterocyclic compound binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU98157 | lncRNA | upstream | 325647 | 18450490 ~ 18450809 (+) | True | G78682 |
| TU98099 | lncRNA | upstream | 699189 | 18058719 ~ 18077267 (+) | True | G78635 |
| TU98069 | lncRNA | upstream | 799151 | 17976174 ~ 17977305 (+) | True | G78607 |
| TU98002 | lncRNA | upstream | 930910 | 17794440 ~ 17845546 (+) | True | G78546 |
| TU97972 | lncRNA | upstream | 1255806 | 17520267 ~ 17520650 (+) | False | G78529 |
| TU98243 | lncRNA | downstream | 157705 | 18963523 ~ 18963725 (+) | True | G78758 |
| TU98245 | lncRNA | downstream | 165477 | 18971295 ~ 18971714 (+) | True | G78760 |
| TU98257 | lncRNA | downstream | 200471 | 19006289 ~ 19010099 (+) | True | G78772 |
| TU98259 | lncRNA | downstream | 200471 | 19006289 ~ 19009946 (+) | False | G78772 |
| TU98262 | lncRNA | downstream | 207584 | 19013402 ~ 19013758 (+) | True | G78774 |
| AMCG00010201 | mRNA | upstream | 91816 | 18678221 ~ 18684640 (+) | True | AMCG00010201 |
| AMCG00010198 | mRNA | upstream | 558083 | 18214015 ~ 18218373 (+) | True | AMCG00010198 |
| AMCG00010199 | mRNA | upstream | 574018 | 18188178 ~ 18202438 (+) | True | AMCG00010199 |
| AMCG00010200 | mRNA | upstream | 598614 | 18170670 ~ 18177842 (+) | True | AMCG00010200 |
| AMCG00010192 | mRNA | upstream | 742305 | 18021692 ~ 18034151 (+) | True | AMCG00010192 |
| AMCG00010203 | mRNA | downstream | 45339 | 18851157 ~ 18866491 (+) | True | AMCG00010203 |
| AMCG00010202 | mRNA | downstream | 68944 | 18874762 ~ 18881791 (+) | True | AMCG00010202 |
| AMCG00010212 | mRNA | downstream | 265109 | 19070927 ~ 19080716 (+) | True | AMCG00010212 |
| AMCG00010213 | mRNA | downstream | 297050 | 19102868 ~ 19108097 (+) | True | AMCG00010213 |
| AMCG00010214 | mRNA | downstream | 310917 | 19116735 ~ 19119081 (+) | True | AMCG00010214 |
| TU97819 | other | upstream | 1422968 | 17344419 ~ 17353488 (+) | True | G78410 |
| TU97800 | other | upstream | 1498458 | 17274387 ~ 17277998 (+) | True | G78396 |
| TU97792 | other | upstream | 1529468 | 17245637 ~ 17246988 (+) | False | AMCG00010160 |
| TU97783 | other | upstream | 1551116 | 17223882 ~ 17225340 (+) | False | AMCG00010164 |
| TU97557 | other | upstream | 2716369 | 16057531 ~ 16060087 (+) | True | G78198 |
| TU98227 | other | downstream | 114093 | 18919911 ~ 18921444 (+) | True | G78743 |
| TU98291 | other | downstream | 281511 | 19087329 ~ 19087754 (+) | True | G78794 |
| TU98308 | other | downstream | 332185 | 19138003 ~ 19139647 (+) | True | AMCG00010216 |
| TU98991 | other | downstream | 3240300 | 22046118 ~ 22047542 (+) | True | G79382 |
| TU99036 | other | downstream | 3552151 | 22357969 ~ 22378809 (+) | False | G79420 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00038309 | False | 2229 | mRNA | 0.55 | 14 | NC_007132.7 | 12079897 ~ 12272543 (-) |
| grasscarp (Ctenopharyngodon idella) | CI01000006_12176092_12189504.mRNA | True | 1415 | mRNA | 0.52 | 8 | CI01000006 | 12176092 ~ 12189828 (+) |
