Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00010249 |
| length | 936 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 3 |
| gene id | AMCG00010249 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 20956381 ~ 20960556 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0001708 | cell fate specification | biological_process |
| GO:0001755 | neural crest cell migration | biological_process |
| GO:0048596 | embryonic camera-type eye morphogenesis | biological_process |
| GO:0021984 | adenohypophysis development | biological_process |
| GO:0060041 | retina development in camera-type eye | biological_process |
| id | description |
|---|---|
| K09332 | RAX, RX; retina and anterior neural fold homeobox protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU98670 | lncRNA | upstream | 183300 | 20769999 ~ 20773081 (+) | True | G79118 |
| TU98664 | lncRNA | upstream | 298547 | 20657349 ~ 20657834 (+) | True | G79113 |
| TU98660 | lncRNA | upstream | 324927 | 20631212 ~ 20631454 (+) | True | G79109 |
| TU98641 | lncRNA | upstream | 488685 | 20467309 ~ 20467696 (+) | True | G79091 |
| TU98631 | lncRNA | upstream | 673659 | 20282359 ~ 20282722 (+) | True | G79081 |
| TU98715 | lncRNA | downstream | 27604 | 20988160 ~ 21000012 (+) | True | G79157 |
| TU98738 | lncRNA | downstream | 90260 | 21050816 ~ 21052576 (+) | True | G79178 |
| TU98755 | lncRNA | downstream | 112980 | 21073536 ~ 21074074 (+) | True | G79190 |
| TU98849 | lncRNA | downstream | 571121 | 21531677 ~ 21532597 (+) | True | G79259 |
| TU98862 | lncRNA | downstream | 668602 | 21629158 ~ 21632876 (+) | True | G79272 |
| AMCG00010245 | mRNA | upstream | 15417 | 20931331 ~ 20940964 (+) | True | AMCG00010245 |
| AMCG00010243 | mRNA | upstream | 31711 | 20898450 ~ 20924670 (+) | True | AMCG00010243 |
| AMCG00010244 | mRNA | upstream | 82217 | 20847771 ~ 20874164 (+) | True | AMCG00010244 |
| AMCG00010237 | mRNA | upstream | 444779 | 20511276 ~ 20511602 (+) | True | AMCG00010237 |
| AMCG00010238 | mRNA | upstream | 445208 | 20510664 ~ 20511173 (+) | True | AMCG00010238 |
| AMCG00010251 | mRNA | downstream | 43733 | 21004289 ~ 21022701 (+) | True | AMCG00010251 |
| AMCG00010256 | mRNA | downstream | 68222 | 21028778 ~ 21047477 (+) | True | AMCG00010256 |
| AMCG00010252 | mRNA | downstream | 120681 | 21081237 ~ 21105093 (+) | True | AMCG00010252 |
| AMCG00010250 | mRNA | downstream | 444627 | 21405183 ~ 21422900 (+) | True | AMCG00010250 |
| AMCG00010257 | mRNA | downstream | 569067 | 21529623 ~ 21530318 (+) | True | AMCG00010257 |
| TU98308 | other | upstream | 1816734 | 19138003 ~ 19139647 (+) | True | AMCG00010216 |
| TU98291 | other | upstream | 1868627 | 19087329 ~ 19087754 (+) | True | G78794 |
| TU98227 | other | upstream | 2034937 | 18919911 ~ 18921444 (+) | True | G78743 |
| TU97819 | other | upstream | 3602893 | 17344419 ~ 17353488 (+) | True | G78410 |
| TU97800 | other | upstream | 3678383 | 17274387 ~ 17277998 (+) | True | G78396 |
| TU98991 | other | downstream | 1085562 | 22046118 ~ 22047542 (+) | True | G79382 |
| TU99036 | other | downstream | 1397413 | 22357969 ~ 22378809 (+) | False | G79420 |
| TU99038 | other | downstream | 1397413 | 22357969 ~ 22378809 (+) | False | G79420 |
| TU99122 | other | downstream | 1739186 | 22699742 ~ 22703374 (+) | True | G79475 |
| TU99126 | other | downstream | 1739253 | 22699809 ~ 22703409 (+) | False | G79475 |
