RNA id: AMCG00010250


Basic Information

Item Value
RNA id AMCG00010250
length 1668
RNA type mRNA
GC content 0.46
exon number 7
gene id AMCG00010250
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 21405183 ~ 21422900 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TATAGACCTCCCGGAAAGCCAAATGTCCAATGCAGATCGCCAGAAAAAGAGACTTTTACTTGCTGGTGGGAGCCAGGTTCTGATGGAGGGCTGCCTACTAACTACTCACTGTTCTACAGAAAGGAAAACTCTGAAACAGTCAACGAGTGTCCAGATTACAAAACAGCTGGGAAAAACTCCTGTTTCTTTGACAAAAATCACACCACTATTTGGGTAACCTACAACATCACTGTCGTGGCAACCAATGCCTTAGGGAGCAATTTTTCTGACCCAAAAGATGTTGACGTGGTATACATCGTTCAGCCCCACAAACCTGAGAATTTGACAGTGGAACTGCAAAACAATGATCAGCCTTACCTTGTGGTGAATTGGGAACCCCCTCGCAAAGCTGACACAAGATCGGGCTGGATCACCCTCATCTACGAGCTGCGCATCAAGCGGGAGAAAGAAGACACATGGGAGaTGCACTTTGCTGGTCAGCAGAAGCAGTACAACCTGTTTAGTTTGCACCCAGGGGAGATTTACATGATTCAAGTTCGGTGTAAACCAGACCATGGATTCTGGAGTGAATGGAGTTCCACTTCCTACATTGAAATCCCTGACTATATTCAAAGAGACAGATCAATTGTGAAGCAGTGGCTGTTGCCACCAGTCCCAGGACCAAAGATTAAAGGATTTGACACACAGTTGCTTAAGtATGGGAAATCGGAAGACATGCTCAGTGCTTTGGTGAGCCAGGGCTTCCCTCCGACCTCAGACTGCGAGGATCTTCTAGTGGAATTCCTAGAGGTGGACGACAGTGATGAGAGGGAGCAAGTGATTAAAGTAAAAGATCTTCAGGAGAACAGAATTAAGTCAGCCAACAATTCACTGGATAATGACTCGGGTCGAGGGAGCTGCGACAGCCACACCCTGCTGCTAGAAAACAGCAATGAACCCAAAATGCCTGGCCTGGATAATGAGCATGTCATGAAAGAAGGCCACAGTGAGGCGACAAAGGATAGAAGTATCAGCCTATCTTGGAACAGCAACCCAGTGAGGCAACTAGACAACTTAGAAAATGCTGACAGGAACACCAAGACCTGGCCAACAAGCTTCTTGTCCCACCATCCTCAGAAACAGTCTTTCCACAGCATCCCTGAAATCCAGAAGCAAGGCTACATTTCAAGCAACCTCCAGTTTATGGCCAATCAGCCAGACCAAGCAGAAAACAACACCGATCCCCGCCCAATCAAAATCTCTACTGGCTATGGAAATCTACAGGGATACAGTGAGTTCTGTGTCAAGATCCCAGAAAACCAAATGACACAAGCATCTGCGTTCCCGCCTTCTAAATTCATGGAGTATGTTGAAGTCCAGAAAGTTAATCAGGAGAACATTctcattttgaaagcaaaaacTCAGGAAAGTCCTCAAGTCTTATCTCCAGAATTCACAGGGCAGGAGTATACCAAGGTGAGCGGTGTGGTAAATGACAATGTCCTTTTGTTGCAAAGGGATGCAGATGCGTCATGTTCCAGTGATCATCAGGAAAGAACAAACCCGGTGGAAAACCCTGGTCTTCAGCggaaattattaaacaatattcCTGTGCCACCCACACAAGACACAGTAATGCAGGTGGCACCAAATGGCTATGTGGATTCATCTGCATTGCCAACCTTCAAT

Function

GO: NA

KEGG:

id description
K05081 PRLR; prolactin receptor

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU98755 lncRNA upstream 331109 21073536 ~ 21074074 (+) True G79190
TU98738 lncRNA upstream 352607 21050816 ~ 21052576 (+) True G79178
TU98715 lncRNA upstream 405171 20988160 ~ 21000012 (+) True G79157
TU98670 lncRNA upstream 632102 20769999 ~ 20773081 (+) True G79118
TU98664 lncRNA upstream 747349 20657349 ~ 20657834 (+) True G79113
TU98849 lncRNA downstream 108777 21531677 ~ 21532597 (+) True G79259
TU98862 lncRNA downstream 206258 21629158 ~ 21632876 (+) True G79272
TU98959 lncRNA downstream 579443 22002343 ~ 22002665 (+) True G79355
TU98961 lncRNA downstream 584491 22007391 ~ 22010144 (+) True G79357
TU98989 lncRNA downstream 621733 22044633 ~ 22045794 (+) True G79380
AMCG00010252 mRNA upstream 300090 21081237 ~ 21105093 (+) True AMCG00010252
AMCG00010256 mRNA upstream 357706 21028778 ~ 21047477 (+) True AMCG00010256
AMCG00010251 mRNA upstream 382482 21004289 ~ 21022701 (+) True AMCG00010251
AMCG00010249 mRNA upstream 444627 20956381 ~ 20960556 (+) True AMCG00010249
AMCG00010245 mRNA upstream 464219 20931331 ~ 20940964 (+) True AMCG00010245
AMCG00010257 mRNA downstream 106723 21529623 ~ 21530318 (+) True AMCG00010257
AMCG00010253 mRNA downstream 210505 21633405 ~ 21656223 (+) True AMCG00010253
AMCG00010255 mRNA downstream 312271 21735171 ~ 21740568 (+) True AMCG00010255
AMCG00010254 mRNA downstream 317874 21740774 ~ 21746219 (+) True AMCG00010254
AMCG00010259 mRNA downstream 324141 21747041 ~ 21756358 (+) True AMCG00010259
TU98308 other upstream 2265536 19138003 ~ 19139647 (+) True AMCG00010216
TU98291 other upstream 2317429 19087329 ~ 19087754 (+) True G78794
TU98227 other upstream 2483739 18919911 ~ 18921444 (+) True G78743
TU97819 other upstream 4051695 17344419 ~ 17353488 (+) True G78410
TU97800 other upstream 4127185 17274387 ~ 17277998 (+) True G78396
TU98991 other downstream 623218 22046118 ~ 22047542 (+) True G79382
TU99036 other downstream 935069 22357969 ~ 22378809 (+) False G79420
TU99038 other downstream 935069 22357969 ~ 22378809 (+) False G79420
TU99122 other downstream 1276842 22699742 ~ 22703374 (+) True G79475
TU99126 other downstream 1276909 22699809 ~ 22703409 (+) False G79475

Expression Profile