Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00010260 |
| length | 1348 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 8 |
| gene id | AMCG00010260 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 21791529 ~ 21826339 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0009396 | folic acid-containing compound biosynthetic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | molecular_function |
| id | description |
|---|---|
| K13403 | MTHFD2; methylenetetrahydrofolate dehydrogenase(NAD+) / 5,10-methenyltetrahydrofolate cyclohydrolase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU98862 | lncRNA | upstream | 158653 | 21629158 ~ 21632876 (+) | True | G79272 |
| TU98849 | lncRNA | upstream | 258932 | 21531677 ~ 21532597 (+) | True | G79259 |
| TU98755 | lncRNA | upstream | 717455 | 21073536 ~ 21074074 (+) | True | G79190 |
| TU98738 | lncRNA | upstream | 738953 | 21050816 ~ 21052576 (+) | True | G79178 |
| TU98715 | lncRNA | upstream | 791517 | 20988160 ~ 21000012 (+) | True | G79157 |
| TU98959 | lncRNA | downstream | 176004 | 22002343 ~ 22002665 (+) | True | G79355 |
| TU98961 | lncRNA | downstream | 181052 | 22007391 ~ 22010144 (+) | True | G79357 |
| TU98989 | lncRNA | downstream | 218294 | 22044633 ~ 22045794 (+) | True | G79380 |
| TU99005 | lncRNA | downstream | 243084 | 22069423 ~ 22071493 (+) | True | G79394 |
| TU99026 | lncRNA | downstream | 408676 | 22235015 ~ 22235264 (+) | True | G79414 |
| AMCG00010259 | mRNA | upstream | 35171 | 21747041 ~ 21756358 (+) | True | AMCG00010259 |
| AMCG00010254 | mRNA | upstream | 45310 | 21740774 ~ 21746219 (+) | True | AMCG00010254 |
| AMCG00010255 | mRNA | upstream | 50961 | 21735171 ~ 21740568 (+) | True | AMCG00010255 |
| AMCG00010253 | mRNA | upstream | 135306 | 21633405 ~ 21656223 (+) | True | AMCG00010253 |
| AMCG00010257 | mRNA | upstream | 261211 | 21529623 ~ 21530318 (+) | True | AMCG00010257 |
| AMCG00010258 | mRNA | downstream | 4786 | 21831125 ~ 21840903 (+) | True | AMCG00010258 |
| AMCG00010261 | mRNA | downstream | 54168 | 21880507 ~ 21886138 (+) | True | AMCG00010261 |
| AMCG00010266 | mRNA | downstream | 191345 | 22017684 ~ 22020958 (+) | True | AMCG00010266 |
| AMCG00010272 | mRNA | downstream | 252949 | 22079288 ~ 22096930 (+) | True | AMCG00010272 |
| AMCG00010278 | mRNA | downstream | 703791 | 22530130 ~ 22541832 (+) | True | AMCG00010278 |
| TU98308 | other | upstream | 2651882 | 19138003 ~ 19139647 (+) | True | AMCG00010216 |
| TU98291 | other | upstream | 2703775 | 19087329 ~ 19087754 (+) | True | G78794 |
| TU98227 | other | upstream | 2870085 | 18919911 ~ 18921444 (+) | True | G78743 |
| TU97819 | other | upstream | 4438041 | 17344419 ~ 17353488 (+) | True | G78410 |
| TU97800 | other | upstream | 4513531 | 17274387 ~ 17277998 (+) | True | G78396 |
| TU98991 | other | downstream | 219779 | 22046118 ~ 22047542 (+) | True | G79382 |
| TU99036 | other | downstream | 531630 | 22357969 ~ 22378809 (+) | False | G79420 |
| TU99038 | other | downstream | 531630 | 22357969 ~ 22378809 (+) | False | G79420 |
| TU99122 | other | downstream | 873403 | 22699742 ~ 22703374 (+) | True | G79475 |
| TU99126 | other | downstream | 873470 | 22699809 ~ 22703409 (+) | False | G79475 |
