RNA id: AMCG00010321



Basic Information


Item Value
RNA id AMCG00010321
length 978
RNA type mRNA
GC content 0.55
exon number 8
gene id AMCG00010321
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 24081293 ~ 24123623 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGAgtgtaatgcattaaaaaaatgcacagGTAAAGCTCTCACCTTCCTGCTGCTGCAGCCACCCAGCCCCAAGCTACCCCCACACAGTACTATCCGACGCACTGCCATCGACCTCATCGGCCGCGGGTTCACCGTCTGGGAGCCATACATGGATGTGTCAGCTGTTCTGATGGGCTTGCTGGAGCTGTGCGCTGACGCTGAGAAACAGCTCGCCAACATCACAATGGGCTTGCCTCTTAGCCCTGCTGCTGACTCAGCCCGCTCGGCTCGACACGCTCTCTCGCTCATCGCCACGGCCAGACCACCAGCCTTCATAACAACCATCGCCAGGGAGGTCCACAGACACACTGCGCTTCAGGCCAACACCCAATCCCAGCAGAACGTTCACACCACTACCTTGGCCCGCGCCAAGGCAGAGATCCTCCGGGTTATCGAGATCCTCATTGAGAAGATGCCTACTGATGTCGTGGATCTACTCGTAGAGGTAATGGACATCATAATGTACTGCCTTGAAGGATCTTTAGTCAAGAAGAAAGGCCTTCAGGAATGTTTCCCTGCAATTTGTAGGTTCTACGTGGTGGGATACTGTGAGCGGAGTCACAGGATAGCAGTAGGGGCTCGCCATGGTTCAGTGGCACTCTACGACGTCCGCACTGGGAAATGTCAGACCATTCATGGACATAAAGGACCCATAACAGCAGTGTCTTTTGCTCCTGATGGGAGATACCTGGCCACGTATTCCAATGCAGACAGTCACATCTCCTTCTGGCAGATGAACACATCGTTGCTGGGCAGTATTGGCATGCTGAATTCAGCCCCTCAGTTGCGCTGCATTAAGACCTACCAGGTCCCGCCAGTGCAGCCTGCTTCCCCCGGCTCCCAGAATGCCCTGAAACTGGCCCGCCTCATCTGGACCTCCAACCGTAATGTCATCCTCATGGCGCATGATGGCAAGGAGCATCGCTTTATGGTCTGA

Function


GO: NA

KEGG:

id description
K24738 WDR7; WD repeat-containing protein 7

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU99501 lncRNA upstream 154537 23920760 ~ 23926756 (+) False AMCG00010320
TU99463 lncRNA upstream 196486 23842459 ~ 23884807 (+) False G79749
TU99467 lncRNA upstream 227857 23851026 ~ 23853436 (+) True G79752
TU99462 lncRNA upstream 236709 23842459 ~ 23844584 (+) True G79749
TU99366 lncRNA upstream 383045 23688730 ~ 23698248 (+) True G79675
TU99545 lncRNA downstream 147652 24271275 ~ 24275684 (+) True G79820
TU99553 lncRNA downstream 171765 24295388 ~ 24298215 (+) True G79827
TU99555 lncRNA downstream 176676 24300299 ~ 24301869 (+) True G79829
TU99580 lncRNA downstream 477509 24601132 ~ 24650632 (+) True G79846
TU99583 lncRNA downstream 600211 24723834 ~ 24727757 (+) True G79849
AMCG00010320 mRNA upstream 71440 23926572 ~ 24009853 (+) True AMCG00010320
AMCG00010319 mRNA upstream 163687 23897773 ~ 23917606 (+) True AMCG00010319
AMCG00010314 mRNA upstream 220593 23857680 ~ 23860700 (+) True AMCG00010314
AMCG00010313 mRNA upstream 244825 23812550 ~ 23836468 (+) True AMCG00010313
AMCG00010315 mRNA upstream 294939 23774521 ~ 23786354 (+) True AMCG00010315
AMCG00010322 mRNA downstream 73853 24197476 ~ 24214335 (+) True AMCG00010322
AMCG00010323 mRNA downstream 104925 24228548 ~ 24229774 (+) True AMCG00010323
AMCG00010324 mRNA downstream 127377 24251000 ~ 24251582 (+) True AMCG00010324
AMCG00010325 mRNA downstream 186738 24310361 ~ 24317700 (+) True AMCG00010325
AMCG00010328 mRNA downstream 490451 24614074 ~ 24625298 (+) True AMCG00010328
TU99126 other upstream 1377884 22699809 ~ 22703409 (+) False G79475
TU99122 other upstream 1377919 22699742 ~ 22703374 (+) True G79475
TU99036 other upstream 1702484 22357969 ~ 22378809 (+) False G79420
TU99038 other upstream 1702484 22357969 ~ 22378809 (+) False G79420
TU98991 other upstream 2033751 22046118 ~ 22047542 (+) True G79382
TU99599 other downstream 709486 24833109 ~ 24837388 (+) True AMCG00010333
TU99797 other downstream 1868935 25992558 ~ 25996414 (+) True AMCG00010366
TU99785 other downstream 1888861 26012484 ~ 26026303 (+) True G80014
TU99961 other downstream 2256844 26380467 ~ 26394522 (+) False AMCG00010369
TU100084 other downstream 3432792 27556415 ~ 27557007 (+) True G80249

Expression Profile