RNA id: AMCG00010378



Basic Information


Item Value
RNA id AMCG00010378
length 495
RNA type mRNA
GC content 0.51
exon number 2
gene id AMCG00010378
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 26917897 ~ 26921875 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGCAGCCGTATCTTCGCAAACCCTGAAACTTCGTGCAATTTTCGAAGCTGACAATATAAGGAAAATTACACTTGACACCCACCCAGAATCTGTTGATGACCTGAAAAGCATATTGAAGGACAAGCTCAAGTGGGATGCAGACTTCAGCTTGGAGTATGAAGACCCTGATTTTGATGGAGAACTTATCTCCCTAGTGGACATTAACGTGTTGCCACAGAAAGCTACACTGAAACTTTTCATGGCAGAAGTGGAAACCAGTTCTATTTCAACTACAGACATAGAGTTGCTGTTGGATGTGTCCTCTCCAGTGCGACTTAAATTGGACATTGTCAACCCCGGCAGCCCTGCGGACCCCGAGCCCACAGACACAGAAGGGACAGGAGAGACTCGCACTCACGGCCCGGACTGCGGCAGCTGTTCTGCGCTGCGGGCCACTCTTCTGCTCCTCACAGAGAGGCGCTTTCTGGAGCAGCACTGGACAGGACTGGGGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU100041 lncRNA upstream 1058 26916541 ~ 26916839 (+) True G80208
TU100040 lncRNA upstream 1762 26915734 ~ 26916135 (+) True G80207
TU99991 lncRNA upstream 415623 26497769 ~ 26502274 (+) True G80163
TU99960 lncRNA upstream 508284 26404606 ~ 26409613 (+) True G80140
TU99958 lncRNA upstream 542541 26373652 ~ 26375356 (+) True G80138
TU100043 lncRNA downstream 156414 27078289 ~ 27078504 (+) True G80210
TU100050 lncRNA downstream 281126 27203001 ~ 27203201 (+) True G80217
TU100068 lncRNA downstream 366704 27288579 ~ 27288856 (+) True G80235
TU100103 lncRNA downstream 873635 27795510 ~ 27796290 (+) True G80264
TU100177 lncRNA downstream 1014291 27936166 ~ 27937054 (+) True G80331
AMCG00010374 mRNA upstream 165961 26747568 ~ 26751936 (+) True AMCG00010374
AMCG00010377 mRNA upstream 182379 26735297 ~ 26735518 (+) True AMCG00010377
AMCG00010372 mRNA upstream 279669 26622349 ~ 26638228 (+) True AMCG00010372
AMCG00010369 mRNA upstream 514877 26380582 ~ 26403020 (+) True AMCG00010369
AMCG00010368 mRNA upstream 552836 26363239 ~ 26365061 (+) True AMCG00010368
AMCG00010380 mRNA downstream 342910 27264785 ~ 27277753 (+) True AMCG00010380
AMCG00010382 mRNA downstream 539167 27461042 ~ 27466622 (+) True AMCG00010382
AMCG00010381 mRNA downstream 586980 27508855 ~ 27509833 (+) True AMCG00010381
AMCG00010379 mRNA downstream 603645 27525520 ~ 27548008 (+) True AMCG00010379
AMCG00010385 mRNA downstream 788738 27710613 ~ 27723371 (+) True AMCG00010385
TU99961 other upstream 523375 26380467 ~ 26394522 (+) False AMCG00010369
TU99785 other upstream 891594 26012484 ~ 26026303 (+) True G80014
TU99797 other upstream 921483 25992558 ~ 25996414 (+) True AMCG00010366
TU99599 other upstream 2080509 24833109 ~ 24837388 (+) True AMCG00010333
TU99126 other upstream 4214488 22699809 ~ 22703409 (+) False G79475
TU100084 other downstream 634540 27556415 ~ 27557007 (+) True G80249
TU100109 other downstream 947582 27869457 ~ 27874931 (+) False AMCG00010393
TU100171 other downstream 984622 27906497 ~ 27906829 (+) True G80326
TU100533 other downstream 2572742 29494617 ~ 29503451 (+) False AMCG00010431
TU101485 other downstream 6981940 33903815 ~ 33935416 (+) False AMCG00010529

Expression Profile