RNA id: AMCG00010511



Basic Information


Item Value
RNA id AMCG00010511
length 465
RNA type mRNA
GC content 0.48
exon number 4
gene id AMCG00010511
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 33105932 ~ 33109710 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATTAAGGAAGCAGTCATCTATATCAACGAAATTGACCCCAGCAAATTCCCCAGATTGCTGTCTCGGATTCTTCAGAAGCTGCACCTCaagGCTGAACGGTCCTTCAGCGttgaggaggaagagaaactACAGAGTGCTCTGTCACTGGAGAAGCCAGCCCTTCATCTAGTGCTGGAGACCATCTCTTTCATTCTAGAGCAGGCTGTATATCACAACGTGAAACCAGCATCTCTAAAGCAGCACCTTGCAAATATCAATTTACACTCCGATAAGGCCGAGGCCTTCTATCAAGCATGGGCGACTGCGGGCCAAGACACCGTCGAAAAATTCAGACAGAGGATGTTTGCTCCTAAAAAGCTGGAGACCGTTGGATGGCAGCTTAATCTACAAATGGCACAGTCCACACAAGCGAAAATGAAATCGCCACATGCTGTTCTGGAGCTTGGAGTCAAAAATGAGGATTCG

Function


GO: NA

KEGG:

id description
K22566 COMMD10; COMM domain containing 10

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU101342 lncRNA upstream 77972 33026897 ~ 33027960 (+) True G81226
TU101326 lncRNA upstream 137425 32968261 ~ 32968507 (+) True G81215
TU101243 lncRNA upstream 431278 32576649 ~ 32674654 (+) True G81149
TU101202 lncRNA upstream 575666 32474033 ~ 32530266 (+) True AMCG00010497
TU101189 lncRNA upstream 637669 32467842 ~ 32468263 (+) True G81115
TU101405 lncRNA downstream 201142 33310852 ~ 33315569 (+) True G81279
TU101487 lncRNA downstream 826704 33936414 ~ 33938237 (+) True AMCG00010529
TU101528 lncRNA downstream 922994 34032704 ~ 34035798 (+) True G81372
TU101539 lncRNA downstream 993128 34102838 ~ 34104640 (+) True G81383
TU101567 lncRNA downstream 1086357 34196067 ~ 34196426 (+) True G81407
AMCG00010510 mRNA upstream 2565 33101960 ~ 33103367 (+) True AMCG00010510
AMCG00010512 mRNA upstream 13990 33077831 ~ 33091942 (+) True AMCG00010512
AMCG00010513 mRNA upstream 48131 33040995 ~ 33057801 (+) True AMCG00010513
AMCG00010502 mRNA upstream 248107 32845391 ~ 32857825 (+) True AMCG00010502
AMCG00010503 mRNA upstream 281934 32805608 ~ 32823998 (+) True AMCG00010503
AMCG00010519 mRNA downstream 429140 33538850 ~ 33583439 (+) True AMCG00010519
AMCG00010517 mRNA downstream 491833 33601543 ~ 33608079 (+) True AMCG00010517
AMCG00010518 mRNA downstream 507312 33617022 ~ 33638956 (+) True AMCG00010518
AMCG00010520 mRNA downstream 550107 33659817 ~ 33670180 (+) True AMCG00010520
AMCG00010529 mRNA downstream 824885 33934595 ~ 33937940 (+) False AMCG00010529
TU100533 other upstream 3602481 29494617 ~ 29503451 (+) False AMCG00010431
TU100171 other upstream 5199103 27906497 ~ 27906829 (+) True G80326
TU100109 other upstream 5231001 27869457 ~ 27874931 (+) False AMCG00010393
TU100084 other upstream 5548925 27556415 ~ 27557007 (+) True G80249
TU99961 other upstream 6711410 26380467 ~ 26394522 (+) False AMCG00010369
TU101485 other downstream 794105 33903815 ~ 33935416 (+) False AMCG00010529
TU101662 other downstream 1591728 34701438 ~ 34707394 (+) True G81496
TU101759 other downstream 1902605 35012315 ~ 35012693 (+) True G81576
TU101832 other downstream 2360625 35470335 ~ 35477584 (+) True AMCG00010562
TU102021 other downstream 2967403 36077113 ~ 36079892 (+) True AMCG00010578

Expression Profile