RNA id: AMCG00010547



Basic Information


Item Value
RNA id AMCG00010547
length 348
RNA type mRNA
GC content 0.50
exon number 2
gene id AMCG00010547
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 34903503 ~ 34904362 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAGTACACCAGATGAAAAGGTTTATCCTAAAGAGCTCAGCAATGGGAAACTGATGATGAGAAAGACGATATTCTGGGATTATCCGCTGCAACTCTCCTGGATGATGGATGGTGAGCCTTTCACTTCCACTCTACTACCAGCAGGGGACGCCATCACGGACACGGGTATGACTCTGGAACAGAAGACGACGTTCGCTTTCGttattttcctctttatttTCCTGGGGATTCTTATTGTCAGGTGTTTCCGCATCCTCCTCGACCCCTATCGGAGCATGCCCACCTCCACCTGGGCAGACGGGCTGGATGGCCTGGAGAAGGGACAGTTTGATTACGCTTTGGCATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU101677 lncRNA upstream 57627 34756519 ~ 34845876 (+) False AMCG00010545
TU101655 lncRNA upstream 207199 34694859 ~ 34696304 (+) True G81489
TU101644 lncRNA upstream 217741 34684289 ~ 34685762 (+) True G81479
TU101639 lncRNA upstream 222787 34679976 ~ 34680716 (+) True G81474
TU101567 lncRNA upstream 707077 34196067 ~ 34196426 (+) True G81407
TU101758 lncRNA downstream 104210 35008572 ~ 35012190 (+) True G81575
TU101760 lncRNA downstream 108593 35012955 ~ 35013654 (+) True G81577
TU101763 lncRNA downstream 111713 35016075 ~ 35016334 (+) True G81580
TU101764 lncRNA downstream 112547 35016909 ~ 35017132 (+) True G81581
TU101765 lncRNA downstream 134895 35039257 ~ 35039467 (+) True G81582
AMCG00010546 mRNA upstream 45982 34847908 ~ 34857521 (+) True AMCG00010546
AMCG00010545 mRNA upstream 58652 34798087 ~ 34844851 (+) True AMCG00010545
AMCG00010544 mRNA upstream 118840 34769669 ~ 34784663 (+) True AMCG00010544
AMCG00010540 mRNA upstream 181827 34708360 ~ 34721676 (+) True AMCG00010540
AMCG00010539 mRNA upstream 208822 34688748 ~ 34694681 (+) True AMCG00010539
AMCG00010550 mRNA downstream 26185 34930547 ~ 34931155 (+) True AMCG00010550
AMCG00010548 mRNA downstream 57986 34962348 ~ 35003888 (+) True AMCG00010548
AMCG00010553 mRNA downstream 195753 35100115 ~ 35107055 (+) True AMCG00010553
AMCG00010552 mRNA downstream 217252 35121614 ~ 35139130 (+) True AMCG00010552
AMCG00010551 mRNA downstream 238204 35142566 ~ 35149632 (+) True AMCG00010551
TU101662 other upstream 196109 34701438 ~ 34707394 (+) True G81496
TU101485 other upstream 968087 33903815 ~ 33935416 (+) False AMCG00010529
TU100533 other upstream 5400052 29494617 ~ 29503451 (+) False AMCG00010431
TU100171 other upstream 6996674 27906497 ~ 27906829 (+) True G80326
TU100109 other upstream 7028572 27869457 ~ 27874931 (+) False AMCG00010393
TU101759 other downstream 107953 35012315 ~ 35012693 (+) True G81576
TU101832 other downstream 565973 35470335 ~ 35477584 (+) True AMCG00010562
TU102021 other downstream 1172751 36077113 ~ 36079892 (+) True AMCG00010578
TU102028 other downstream 1187177 36091539 ~ 36094376 (+) False AMCG00010585
TU102256 other downstream 2326066 37230428 ~ 37251169 (+) True G81971

Expression Profile