Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00010655 |
| length | 1080 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 5 |
| gene id | AMCG00010655 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 38348278 ~ 38353962 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0016192 | vesicle-mediated transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| K08513 | VAMP4; vesicle-associated membrane protein 4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU102610 | lncRNA | upstream | 60750 | 38285579 ~ 38287528 (+) | True | G82250 |
| TU102594 | lncRNA | upstream | 96268 | 38247021 ~ 38252010 (+) | True | AMCG00010648 |
| TU102589 | lncRNA | upstream | 191680 | 38156397 ~ 38156598 (+) | True | G82234 |
| TU102586 | lncRNA | upstream | 237723 | 38110249 ~ 38110555 (+) | True | G82231 |
| TU102585 | lncRNA | upstream | 250992 | 38097026 ~ 38097286 (+) | True | G82230 |
| TU102651 | lncRNA | downstream | 13707 | 38367669 ~ 38370042 (+) | True | AMCG00010656 |
| TU102649 | lncRNA | downstream | 69518 | 38423480 ~ 38425049 (+) | True | G82285 |
| TU102751 | lncRNA | downstream | 120888 | 38474850 ~ 38475108 (+) | True | G82338 |
| TU102752 | lncRNA | downstream | 123257 | 38477219 ~ 38483324 (+) | True | G82339 |
| TU102776 | lncRNA | downstream | 204504 | 38558466 ~ 38564283 (+) | True | G82353 |
| AMCG00010653 | mRNA | upstream | 9264 | 38325685 ~ 38339014 (+) | True | AMCG00010653 |
| AMCG00010652 | mRNA | upstream | 30474 | 38306254 ~ 38317804 (+) | True | AMCG00010652 |
| AMCG00010650 | mRNA | upstream | 69909 | 38277317 ~ 38278369 (+) | True | AMCG00010650 |
| AMCG00010648 | mRNA | upstream | 96626 | 38248087 ~ 38251652 (+) | False | AMCG00010648 |
| AMCG00010643 | mRNA | upstream | 297331 | 38043745 ~ 38050947 (+) | True | AMCG00010643 |
| AMCG00010656 | mRNA | downstream | 16062 | 38370024 ~ 38372651 (+) | False | AMCG00010656 |
| AMCG00010654 | mRNA | downstream | 21497 | 38375459 ~ 38378170 (+) | True | AMCG00010654 |
| AMCG00010660 | mRNA | downstream | 93341 | 38447303 ~ 38458936 (+) | True | AMCG00010660 |
| AMCG00010661 | mRNA | downstream | 114410 | 38468372 ~ 38474161 (+) | True | AMCG00010661 |
| AMCG00010670 | mRNA | downstream | 130159 | 38484121 ~ 38487527 (+) | True | AMCG00010670 |
| TU102593 | other | upstream | 96268 | 38247021 ~ 38252010 (+) | False | AMCG00010648 |
| TU102591 | other | upstream | 178747 | 38169156 ~ 38169531 (+) | True | G82236 |
| TU102525 | other | upstream | 460115 | 37886220 ~ 37888163 (+) | True | G82192 |
| TU102276 | other | upstream | 1084229 | 37261324 ~ 37264049 (+) | True | G81987 |
| TU102257 | other | upstream | 1097109 | 37235766 ~ 37251169 (+) | False | G81971 |
| TU102794 | other | downstream | 283541 | 38637503 ~ 38640125 (+) | True | AMCG00010681 |
| TU102818 | other | downstream | 428117 | 38782079 ~ 38790768 (+) | False | AMCG00010687 |
| TU102819 | other | downstream | 428117 | 38782079 ~ 38790768 (+) | False | AMCG00010687 |
| TU102820 | other | downstream | 428117 | 38782079 ~ 38790768 (+) | True | AMCG00010687 |
| TU102822 | other | downstream | 428117 | 38782079 ~ 38790768 (+) | False | AMCG00010687 |
