Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00010669 |
| length | 1176 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 5 |
| gene id | AMCG00010669 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 38515937 ~ 38534810 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0000413 | protein peptidyl-prolyl isomerization | biological_process |
| GO:0006457 | protein folding | biological_process |
| GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU102752 | lncRNA | upstream | 32613 | 38477219 ~ 38483324 (+) | True | G82339 |
| TU102751 | lncRNA | upstream | 40829 | 38474850 ~ 38475108 (+) | True | G82338 |
| TU102649 | lncRNA | upstream | 90888 | 38423480 ~ 38425049 (+) | True | G82285 |
| TU102651 | lncRNA | upstream | 145895 | 38367669 ~ 38370042 (+) | True | AMCG00010656 |
| TU102627 | lncRNA | upstream | 162104 | 38352219 ~ 38353833 (+) | False | AMCG00010655 |
| TU102776 | lncRNA | downstream | 23656 | 38558466 ~ 38564283 (+) | True | G82353 |
| TU102860 | lncRNA | downstream | 257515 | 38792325 ~ 38797886 (+) | False | AMCG00010687 |
| TU102926 | lncRNA | downstream | 492274 | 39027084 ~ 39027418 (+) | True | G82468 |
| TU102954 | lncRNA | downstream | 568110 | 39102920 ~ 39103266 (+) | True | G82488 |
| TU102961 | lncRNA | downstream | 616997 | 39151807 ~ 39152153 (+) | True | G82495 |
| AMCG00010671 | mRNA | upstream | 27651 | 38487689 ~ 38488286 (+) | True | AMCG00010671 |
| AMCG00010670 | mRNA | upstream | 28410 | 38484121 ~ 38487527 (+) | True | AMCG00010670 |
| AMCG00010661 | mRNA | upstream | 41776 | 38468372 ~ 38474161 (+) | True | AMCG00010661 |
| AMCG00010660 | mRNA | upstream | 57001 | 38447303 ~ 38458936 (+) | True | AMCG00010660 |
| AMCG00010654 | mRNA | upstream | 137767 | 38375459 ~ 38378170 (+) | True | AMCG00010654 |
| AMCG00010672 | mRNA | downstream | 96994 | 38631804 ~ 38633945 (+) | True | AMCG00010672 |
| AMCG00010681 | mRNA | downstream | 101666 | 38636476 ~ 38638532 (+) | False | AMCG00010681 |
| AMCG00010673 | mRNA | downstream | 118075 | 38652885 ~ 38661453 (+) | True | AMCG00010673 |
| AMCG00010684 | mRNA | downstream | 137387 | 38672197 ~ 38673526 (+) | True | AMCG00010684 |
| AMCG00010675 | mRNA | downstream | 137414 | 38672224 ~ 38675740 (+) | True | AMCG00010675 |
| TU102593 | other | upstream | 263927 | 38247021 ~ 38252010 (+) | False | AMCG00010648 |
| TU102591 | other | upstream | 346406 | 38169156 ~ 38169531 (+) | True | G82236 |
| TU102525 | other | upstream | 627774 | 37886220 ~ 37888163 (+) | True | G82192 |
| TU102276 | other | upstream | 1251888 | 37261324 ~ 37264049 (+) | True | G81987 |
| TU102257 | other | upstream | 1264768 | 37235766 ~ 37251169 (+) | False | G81971 |
| TU102794 | other | downstream | 102693 | 38637503 ~ 38640125 (+) | True | AMCG00010681 |
| TU102818 | other | downstream | 247269 | 38782079 ~ 38790768 (+) | False | AMCG00010687 |
| TU102819 | other | downstream | 247269 | 38782079 ~ 38790768 (+) | False | AMCG00010687 |
| TU102820 | other | downstream | 247269 | 38782079 ~ 38790768 (+) | True | AMCG00010687 |
| TU102822 | other | downstream | 247269 | 38782079 ~ 38790768 (+) | False | AMCG00010687 |
